RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 KLF5Q13887 457 aaPredicted RBP12.74□□□□□ -0.37
UBC-208ENST00000540700 UNQ9165/PRO28630Q6UXU0 137 aa12.74□□□□□ -0.37
UBC-208ENST00000540700 TMEM116Q8NCL8 245 aa12.74□□□□□ -0.37
UBC-208ENST00000540700 NPIPB3Q92617 1050 aa12.74□□□□□ -0.37
UBC-208ENST00000540700 TXN2Q99757 166 aa12.74□□□□□ -0.37
UBC-208ENST00000540700 IGKV1OR2-108A0A075B7D4 117 aa12.73□□□□□ -0.37
UBC-208ENST00000540700 RPS10-NUDT3A0A1W2PQS6 291 aa12.73□□□□□ -0.37
UBC-208ENST00000540700 WI2-2373I1.2A0A1W2PRP0 233 aa12.73□□□□□ -0.37
UBC-208ENST00000540700 E5RGE8 158 aa12.73□□□□□ -0.37
UBC-208ENST00000540700 GGCTO75223 188 aaKnown RBP12.73□□□□□ -0.37
UBC-208ENST00000540700 IGKV1-17P01599 117 aa12.73□□□□□ -0.37
UBC-208ENST00000540700 IGLC1P0CG04 106 aa12.73□□□□□ -0.37
UBC-208ENST00000540700 SYNJ2BPP57105 145 aa12.73□□□□□ -0.37
UBC-208ENST00000540700 ACY3Q96HD9 319 aa12.73□□□□□ -0.37
UBC-208ENST00000540700 ATP6V0BQ99437 205 aa12.73□□□□□ -0.37
UBC-208ENST00000540700 GNG7O60262 68 aa12.72□□□□□ -0.37
UBC-208ENST00000540700 SLC25A4P12235 298 aa12.72□□□□□ -0.37
UBC-208ENST00000540700 PVALBP20472 110 aaPredicted RBP12.72□□□□□ -0.37
UBC-208ENST00000540700 P2RY1P47900 373 aa12.72□□□□□ -0.37
UBC-208ENST00000540700 RAP2BP61225 183 aa12.72□□□□□ -0.37
UBC-208ENST00000540700 TIGITQ495A1 244 aa12.72□□□□□ -0.37
UBC-208ENST00000540700 FAM209BQ5JX69 171 aa12.72□□□□□ -0.37
UBC-208ENST00000540700 WFDC9Q8NEX5 89 aa12.72□□□□□ -0.37
UBC-208ENST00000540700 RLN2P04090 185 aa12.71□□□□□ -0.37
UBC-208ENST00000540700 ZP3P21754 424 aa12.71□□□□□ -0.37
UBC-208ENST00000540700 NPBWR1P48145 328 aa12.71□□□□□ -0.37
UBC-208ENST00000540700 KRTAP10-11P60412 298 aa12.71□□□□□ -0.37
UBC-208ENST00000540700 EWSR1Q01844 656 aaKnown RBP eCLIP12.71□□□□□ -0.371e-9■■□□□ 12.2
UBC-208ENST00000540700 NHLH2Q02577 135 aa12.71□□□□□ -0.37
UBC-208ENST00000540700 RPEL1Q2QD12 228 aa12.71□□□□□ -0.37
UBC-208ENST00000540700 ETFRF1Q6IPR1 90 aa12.71□□□□□ -0.37
UBC-208ENST00000540700 IL34Q6ZMJ4 242 aa12.71□□□□□ -0.37
UBC-208ENST00000540700 TMEM217Q8N7C4 229 aa12.71□□□□□ -0.37
UBC-208ENST00000540700 OR2T35Q8NGX2 323 aa12.71□□□□□ -0.37
UBC-208ENST00000540700 CACNG8Q8WXS5 425 aa12.71□□□□□ -0.37
UBC-208ENST00000540700 RCC1LQ96I51 464 aaKnown RBP12.71□□□□□ -0.37
UBC-208ENST00000540700 RYR2Q92736 4967 aa12.71□□□□□ -0.37
UBC-208ENST00000540700 BIRC6Q9NR09 4857 aa12.71□□□□□ -0.38
UBC-208ENST00000540700 EPPK1P58107 5090 aaKnown RBP12.7□□□□□ -0.38
UBC-208ENST00000540700 IGHV3OR16-8A0A075B7F1 116 aa12.7□□□□□ -0.38
UBC-208ENST00000540700 OR10J1P30954 320 aa12.7□□□□□ -0.38
UBC-208ENST00000540700 SULT1A1P50225 295 aa12.7□□□□□ -0.38
UBC-208ENST00000540700 SPSB3Q6PJ21 355 aa12.7□□□□□ -0.38
UBC-208ENST00000540700 ADAMTSL5Q6ZMM2 481 aa12.7□□□□□ -0.38
UBC-208ENST00000540700 GPHB5Q86YW7 130 aa12.7□□□□□ -0.38
UBC-208ENST00000540700 THAP8Q8NA92 274 aa12.7□□□□□ -0.38
UBC-208ENST00000540700 OR10P1Q8NGE3 313 aa12.7□□□□□ -0.38
UBC-208ENST00000540700 ASB13Q8WXK3 278 aa12.7□□□□□ -0.38
UBC-208ENST00000540700 ST6GAL2Q96JF0 529 aa12.7□□□□□ -0.38
UBC-208ENST00000540700 SLC35E1Q96K37 410 aa12.7□□□□□ -0.38
UBC-208ENST00000540700 OVOL1O14753 267 aa12.69□□□□□ -0.38
UBC-208ENST00000540700 NUPL2O15504 423 aaKnown RBP12.69□□□□□ -0.38
UBC-208ENST00000540700 DLK1P80370 383 aa12.69□□□□□ -0.38
UBC-208ENST00000540700 ZNF90Q03938 601 aa12.69□□□□□ -0.38
UBC-208ENST00000540700 SLC38A11Q08AI6 406 aa12.69□□□□□ -0.38
UBC-208ENST00000540700 TMEM182Q6ZP80 229 aaPredicted RBP12.69□□□□□ -0.38
UBC-208ENST00000540700 OR1S2Q8NGQ3 325 aa12.69□□□□□ -0.38
UBC-208ENST00000540700 ZFAND3Q9H8U3 227 aa12.69□□□□□ -0.38
UBC-208ENST00000540700 STAB2Q8WWQ8 2551 aa12.68□□□□□ -0.38
UBC-208ENST00000540700 PET100P0DJ07 73 aa12.68□□□□□ -0.38
UBC-208ENST00000540700 CD300CQ08708 224 aa12.68□□□□□ -0.38
UBC-208ENST00000540700 TOMM20LQ6UXN7 152 aa12.68□□□□□ -0.38
UBC-208ENST00000540700 TMEM190Q8WZ59 177 aa12.68□□□□□ -0.38
UBC-208ENST00000540700 TMEM213A2RRL7 107 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 SMCO3A2RU48 225 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 LGALS9O00182 355 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 NDUFA4O00483 81 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 CSN3P07498 182 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 RPL12P30050 165 aaKnown RBP12.67□□□□□ -0.38
UBC-208ENST00000540700 VWC2Q2TAL6 325 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 TM4SF20Q53R12 229 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 TMEM144Q7Z5S9 345 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 STX12Q86Y82 276 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 OR11H4Q8NGC9 324 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 OR9G4Q8NGQ1 327 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 THAP6Q8TBB0 222 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 B9D2Q9BPU9 175 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 GAR1Q9NY12 217 aaKnown RBP12.67□□□□□ -0.38
UBC-208ENST00000540700 HSPB11Q9Y547 144 aa12.67□□□□□ -0.38
UBC-208ENST00000540700 PUS1Q9Y606 427 aaKnown RBP eCLIP12.67□□□□□ -0.38
UBC-208ENST00000540700 RNF222A6NCQ9 220 aa12.66□□□□□ -0.38
UBC-208ENST00000540700 FNDC10F2Z333 226 aa12.66□□□□□ -0.38
UBC-208ENST00000540700 ZNF207O43670 478 aaKnown RBP12.66□□□□□ -0.38
UBC-208ENST00000540700 GATA2P23769 480 aaPredicted RBP12.66□□□□□ -0.38
UBC-208ENST00000540700 AKR1C1Q04828 323 aa12.66□□□□□ -0.38
UBC-208ENST00000540700 ZNF600Q6ZNG1 722 aa12.66□□□□□ -0.38
UBC-208ENST00000540700 OR5C1Q8NGR4 320 aa12.66□□□□□ -0.38
UBC-208ENST00000540700 GGACTQ9BVM4 153 aa12.66□□□□□ -0.38
UBC-208ENST00000540700 SLC25A31Q9H0C2 315 aa12.66□□□□□ -0.38
UBC-208ENST00000540700 WFDC1Q9HC57 220 aa12.66□□□□□ -0.38
UBC-208ENST00000540700 LSM4Q9Y4Z0 139 aaKnown RBP12.66□□□□□ -0.38
UBC-208ENST00000540700 SELENOKQ9Y6D0 94 aa12.66□□□□□ -0.38
UBC-208ENST00000540700 TENM2Q9NT68 2774 aa12.66□□□□□ -0.38
UBC-208ENST00000540700 DYNC2H1Q8NCM8 4307 aaKnown RBP12.66□□□□□ -0.38
UBC-208ENST00000540700 TRAV30A0A087WSZ9 112 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 FXYD6-FXYD2A0A087WZ82 144 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 ZNF320A2RRD8 509 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 C2orf70A6NJV1 201 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 ZFP92A6NM28 416 aa12.65□□□□□ -0.38
UBC-208ENST00000540700 A8MWP6 167 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms