RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 OR1S2Q8NGQ3 325 aa15.45■□□□□ 0.06
CHFR-217ENST00000540537 CSTL1Q9H114 145 aa15.45■□□□□ 0.06
CHFR-217ENST00000540537 PRR13Q9NZ81 148 aa15.45■□□□□ 0.06
CHFR-217ENST00000540537 SHPKQ9UHJ6 478 aa15.45■□□□□ 0.06
CHFR-217ENST00000540537 IGLC1P0CG04 106 aa15.44■□□□□ 0.06
CHFR-217ENST00000540537 AKR1C4P17516 323 aa15.44■□□□□ 0.06
CHFR-217ENST00000540537 NPY1RP25929 384 aa15.44■□□□□ 0.06
CHFR-217ENST00000540537 CCR6P51684 374 aa15.44■□□□□ 0.06
CHFR-217ENST00000540537 AP3S2P59780 193 aa15.44■□□□□ 0.06
CHFR-217ENST00000540537 RPL11P62913 178 aaKnown RBP15.44■□□□□ 0.06
CHFR-217ENST00000540537 SUPT4H1P63272 117 aaKnown RBP15.44■□□□□ 0.06
CHFR-217ENST00000540537 SRPXP78539 464 aa15.44■□□□□ 0.06
CHFR-217ENST00000540537 KLF9Q13886 244 aaPredicted RBP15.44■□□□□ 0.06
CHFR-217ENST00000540537 ETFRF1Q6IPR1 90 aa15.44■□□□□ 0.06
CHFR-217ENST00000540537 TMEM170AQ8WVE7 144 aa15.44■□□□□ 0.06
CHFR-217ENST00000540537 NARS2Q96I59 477 aaKnown RBP15.44■□□□□ 0.06
CHFR-217ENST00000540537 MPTX1A8MV57 137 aa15.43■□□□□ 0.06
CHFR-217ENST00000540537 NXPH3O95157 252 aa15.43■□□□□ 0.06
CHFR-217ENST00000540537 ANXA3P12429 323 aa15.43■□□□□ 0.06
CHFR-217ENST00000540537 RND2P52198 227 aa15.43■□□□□ 0.06
CHFR-217ENST00000540537 LGI3Q8N145 548 aa15.43■□□□□ 0.06
CHFR-217ENST00000540537 TRIM63Q969Q1 353 aa15.43■□□□□ 0.06
CHFR-217ENST00000540537 HSPB7Q9UBY9 170 aa15.43■□□□□ 0.06
CHFR-217ENST00000540537 PIGBOS1A0A0B4J2F0 54 aa15.42■□□□□ 0.06
CHFR-217ENST00000540537 OR10J1P30954 320 aa15.42■□□□□ 0.06
CHFR-217ENST00000540537 P2RY1P47900 373 aa15.42■□□□□ 0.06
CHFR-217ENST00000540537 YPEL3P61236 119 aaPredicted RBP15.42■□□□□ 0.06
CHFR-217ENST00000540537 SMCO1Q147U7 214 aa15.42■□□□□ 0.06
CHFR-217ENST00000540537 PYDC2Q56P42 97 aa15.42■□□□□ 0.06
CHFR-217ENST00000540537 LYZL2Q7Z4W2 148 aa15.42■□□□□ 0.06
CHFR-217ENST00000540537 GATAD1Q8WUU5 269 aa15.42■□□□□ 0.06
CHFR-217ENST00000540537 V9GYH0 126 aa15.42■□□□□ 0.06
CHFR-217ENST00000540537 DEFB131AP59861 70 aa15.41■□□□□ 0.06
CHFR-217ENST00000540537 EWSR1Q01844 656 aaKnown RBP eCLIP15.41■□□□□ 0.06
CHFR-217ENST00000540537 TOMM5Q8N4H5 51 aa15.41■□□□□ 0.06
CHFR-217ENST00000540537 TMEM217Q8N7C4 229 aa15.41■□□□□ 0.06
CHFR-217ENST00000540537 Q8WTZ3 238 aa15.41■□□□□ 0.06
CHFR-217ENST00000540537 GRAMD2BQ96HH9 432 aa15.41■□□□□ 0.06
CHFR-217ENST00000540537 RABAC1Q9UI14 185 aa15.41■□□□□ 0.06
CHFR-217ENST00000540537 U3KQ87 197 aa15.41■□□□□ 0.06
CHFR-217ENST00000540537 U3KQE9 123 aa15.41■□□□□ 0.06
CHFR-217ENST00000540537 CXorf65A6NEN9 183 aa15.4■□□□□ 0.06
CHFR-217ENST00000540537 FAM24BQ8N5W8 94 aa15.4■□□□□ 0.06
CHFR-217ENST00000540537 DTD1Q8TEA8 209 aa15.4■□□□□ 0.06
CHFR-217ENST00000540537 DEDD2Q8WXF8 326 aa15.4■□□□□ 0.06
CHFR-217ENST00000540537 DUXBA0A1W2PPF3 345 aa15.39■□□□□ 0.05
CHFR-217ENST00000540537 NUPR2A6NF83 97 aa15.39■□□□□ 0.05
CHFR-217ENST00000540537 CCDC160A6NGH7 325 aa15.39■□□□□ 0.05
CHFR-217ENST00000540537 K7EQG2 157 aa15.39■□□□□ 0.05
CHFR-217ENST00000540537 IFNA10P01566 189 aa15.39■□□□□ 0.05
CHFR-217ENST00000540537 HNRNPCP07910 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
CHFR-217ENST00000540537 S100A5P33763 92 aa15.39■□□□□ 0.05
CHFR-217ENST00000540537 PMS2P11Q13670 270 aa15.39■□□□□ 0.05
CHFR-217ENST00000540537 LEMD1Q68G75 181 aa15.39■□□□□ 0.05
CHFR-217ENST00000540537 STXBP6Q8NFX7 210 aa15.39■□□□□ 0.05
CHFR-217ENST00000540537 NPIPB3Q92617 1050 aa15.39■□□□□ 0.05
CHFR-217ENST00000540537 RBKSQ9H477 322 aa15.39■□□□□ 0.05
CHFR-217ENST00000540537 EIF2B2P49770 351 aaKnown RBP15.38■□□□□ 0.05
CHFR-217ENST00000540537 ATP5IP56385 69 aaPredicted RBP15.38■□□□□ 0.05
CHFR-217ENST00000540537 RBMS2Q15434 407 aaKnown RBP15.38■□□□□ 0.05
CHFR-217ENST00000540537 ZNF79Q15937 498 aa15.38■□□□□ 0.05
CHFR-217ENST00000540537 TMEM128Q5BJH2 165 aa15.38■□□□□ 0.05
CHFR-217ENST00000540537 TMED4Q7Z7H5 227 aa15.38■□□□□ 0.05
CHFR-217ENST00000540537 HELTA6NFD8 242 aa15.37■□□□□ 0.05
CHFR-217ENST00000540537 TOMM40O96008 361 aa15.37■□□□□ 0.05
CHFR-217ENST00000540537 CA1P00915 261 aaPredicted RBP15.37■□□□□ 0.05
CHFR-217ENST00000540537 IL4P05112 153 aa15.37■□□□□ 0.05
CHFR-217ENST00000540537 CCDC190Q86UF4 302 aa15.37■□□□□ 0.05
CHFR-217ENST00000540537 OR1S1Q8NH92 325 aa15.37■□□□□ 0.05
CHFR-217ENST00000540537 DCANP1Q8TF63 244 aa15.37■□□□□ 0.05
CHFR-217ENST00000540537 ACY3Q96HD9 319 aa15.37■□□□□ 0.05
CHFR-217ENST00000540537 RARRES2Q99969 163 aa15.37■□□□□ 0.05
CHFR-217ENST00000540537 SLC25A21Q9BQT8 299 aaPredicted RBP15.37■□□□□ 0.05
CHFR-217ENST00000540537 AGRNO00468 2067 aa15.37■□□□□ 0.05
CHFR-217ENST00000540537 C16orf54Q6UWD8 224 aa15.36■□□□□ 0.05
CHFR-217ENST00000540537 STHQ8IWL8 128 aa15.36■□□□□ 0.05
CHFR-217ENST00000540537 LRTM2Q8N967 370 aa15.36■□□□□ 0.05
CHFR-217ENST00000540537 GLMPQ8WWB7 406 aa15.36■□□□□ 0.05
CHFR-217ENST00000540537 RBM38Q9H0Z9 239 aaKnown RBP15.36■□□□□ 0.05
CHFR-217ENST00000540537 PITX3O75364 302 aa15.35■□□□□ 0.05
CHFR-217ENST00000540537 IFNA4P05014 189 aa15.35■□□□□ 0.05
CHFR-217ENST00000540537 RD3LP0DJH9 198 aa15.35■□□□□ 0.05
CHFR-217ENST00000540537 AP2S1P53680 142 aaPredicted RBP15.35■□□□□ 0.05
CHFR-217ENST00000540537 USF2Q15853 346 aaPredicted RBP15.35■□□□□ 0.05
CHFR-217ENST00000540537 CEMP1Q6PRD7 247 aaPredicted RBP15.35■□□□□ 0.05
CHFR-217ENST00000540537 C11orf68Q9H3H3 251 aaKnown RBP15.35■□□□□ 0.05
CHFR-217ENST00000540537 ZNF701M0R085 212 aaPredicted RBP15.34■□□□□ 0.05
CHFR-217ENST00000540537 ZNF688P0C7X2 276 aa15.34■□□□□ 0.05
CHFR-217ENST00000540537 SLC25A6P12236 298 aa15.34■□□□□ 0.05
CHFR-217ENST00000540537 GPX4P36969 197 aaPredicted RBP15.34■□□□□ 0.05
CHFR-217ENST00000540537 TRPT1Q86TN4 253 aaKnown RBP15.34■□□□□ 0.05
CHFR-217ENST00000540537 OR11H2Q8NH07 326 aa15.34■□□□□ 0.05
CHFR-217ENST00000540537 EPPK1P58107 5090 aaKnown RBP15.33■□□□□ 0.05
CHFR-217ENST00000540537 VAMP1P23763 118 aa15.33■□□□□ 0.04
CHFR-217ENST00000540537 DHRS2Q13268 280 aa15.33■□□□□ 0.04
CHFR-217ENST00000540537 TMEM41BQ5BJD5 291 aa15.33■□□□□ 0.04
CHFR-217ENST00000540537 LINC00476Q8WZB0 136 aa15.33■□□□□ 0.04
CHFR-217ENST00000540537 FAM90A26D6RGX4 464 aa15.32■□□□□ 0.04
CHFR-217ENST00000540537 BUB3O43684 328 aa15.32■□□□□ 0.04
CHFR-217ENST00000540537 SFT2D2O95562 160 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms