RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 SCGB2A1O75556 95 aa9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 SLC25A4P12235 298 aa9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 TNFSF8P32971 234 aa9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 YPEL3P61236 119 aaPredicted RBP9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 SUPT4H1P63272 117 aaKnown RBP9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 FAM24BQ8N5W8 94 aa9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 OR1S2Q8NGQ3 325 aa9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 DCANP1Q8TF63 244 aa9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 METTL26Q96S19 204 aa9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 HEYLQ9NQ87 328 aaPredicted RBP9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 SCP2D1Q9UJQ7 156 aa9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 KCNIP3Q9Y2W7 256 aa9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 A0A0B4J2A0 478 aa9.59□□□□□ -0.87
SEMA4D-223ENST00000540475 IGHV3-66A0A0C4DH42 116 aa9.59□□□□□ -0.87
SEMA4D-223ENST00000540475 DNASE2O00115 360 aaPredicted RBP9.59□□□□□ -0.87
SEMA4D-223ENST00000540475 SULT1A3P0DMM9 295 aa9.59□□□□□ -0.87
SEMA4D-223ENST00000540475 SULT1A4P0DMN0 295 aa9.59□□□□□ -0.87
SEMA4D-223ENST00000540475 TIGITQ495A1 244 aa9.59□□□□□ -0.87
SEMA4D-223ENST00000540475 NOXA1Q86UR1 476 aa9.59□□□□□ -0.87
SEMA4D-223ENST00000540475 SLC24A4Q8NFF2 622 aa9.59□□□□□ -0.87
SEMA4D-223ENST00000540475 C11orf68Q9H3H3 251 aaKnown RBP9.59□□□□□ -0.87
SEMA4D-223ENST00000540475 HSPB7Q9UBY9 170 aa9.59□□□□□ -0.87
SEMA4D-223ENST00000540475 SHPKQ9UHJ6 478 aa9.59□□□□□ -0.87
SEMA4D-223ENST00000540475 CXorf65A6NEN9 183 aa9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 FABP12A6NFH5 140 aa9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 NXPH3O95157 252 aa9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 GIG44P09565 113 aaPredicted RBP9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 P2RY1P47900 373 aa9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 CCR6P51684 374 aa9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 ATP5IP56385 69 aaPredicted RBP9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 DEFB131AP59861 70 aa9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 RBMS2Q15434 407 aaKnown RBP9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 ETFRF1Q6IPR1 90 aa9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 C16orf54Q6UWD8 224 aa9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 Q8WTZ3 238 aa9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 RARRES2Q99969 163 aa9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 SEPSECSQ9HD40 501 aaKnown RBP9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 U3KQ87 197 aa9.58□□□□□ -0.88
SEMA4D-223ENST00000540475 NPY1RP25929 384 aa9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 OR10J1P30954 320 aa9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 RND2P52198 227 aa9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 RPL11P62913 178 aaKnown RBP9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 PMS2P11Q13670 270 aa9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 KLF9Q13886 244 aaPredicted RBP9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 TMEM41BQ5BJD5 291 aa9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 LYZL2Q7Z4W2 148 aa9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 TRPT1Q86TN4 253 aaKnown RBP9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 OR11H2Q8NH07 326 aa9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 GLMPQ8WWB7 406 aa9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 DEDD2Q8WXF8 326 aa9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 TRIM63Q969Q1 353 aa9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 KLK5Q9Y337 293 aaPredicted RBP9.57□□□□□ -0.88
SEMA4D-223ENST00000540475 PIGBOS1A0A0B4J2F0 54 aa9.56□□□□□ -0.88
SEMA4D-223ENST00000540475 HELTA6NFD8 242 aa9.56□□□□□ -0.88
SEMA4D-223ENST00000540475 CEBPZOSA8MTT3 80 aa9.56□□□□□ -0.88
SEMA4D-223ENST00000540475 PITX3O75364 302 aa9.56□□□□□ -0.88
SEMA4D-223ENST00000540475 TOMM40O96008 361 aa9.56□□□□□ -0.88
SEMA4D-223ENST00000540475 HNRNPCP07910 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
SEMA4D-223ENST00000540475 AP2S1P53680 142 aaPredicted RBP9.56□□□□□ -0.88
SEMA4D-223ENST00000540475 SMCO1Q147U7 214 aa9.56□□□□□ -0.88
SEMA4D-223ENST00000540475 LEMD1Q68G75 181 aa9.56□□□□□ -0.88
SEMA4D-223ENST00000540475 LRTM2Q8N967 370 aa9.56□□□□□ -0.88
SEMA4D-223ENST00000540475 MCFD2Q8NI22 146 aa9.56□□□□□ -0.88
SEMA4D-223ENST00000540475 NARS2Q96I59 477 aaKnown RBP9.56□□□□□ -0.88
SEMA4D-223ENST00000540475 DUXBA0A1W2PPF3 345 aa9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 BUB3O43684 328 aa9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 CA1P00915 261 aaPredicted RBP9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 SPP1P10451 314 aa9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 ANXA3P12429 323 aa9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 GPX4P36969 197 aaPredicted RBP9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 SRPXP78539 464 aa9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 USF2Q15853 346 aaPredicted RBP9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 MORN3Q6PF18 240 aaPredicted RBP9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 STHQ8IWL8 128 aa9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 LGI3Q8N145 548 aa9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 PHLDA1Q8WV24 401 aaPredicted RBP9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 NPIPB3Q92617 1050 aa9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 PRR13Q9NZ81 148 aa9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 RABAC1Q9UI14 185 aa9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 V9GYH0 126 aa9.55□□□□□ -0.88
SEMA4D-223ENST00000540475 DNAH2Q9P225 4427 aa9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 ZNF705EA8MWA4 302 aaPredicted RBP9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 SLC25A6P12236 298 aa9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 AKR1C4P17516 323 aa9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 EIF2B2P49770 351 aaKnown RBP9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 TMEM128Q5BJH2 165 aa9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 Q8NAQ8 132 aa9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 CSNK1G2-AS1Q8NCQ2 148 aa9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 STXBP6Q8NFX7 210 aa9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 DTD1Q8TEA8 209 aa9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 MFFQ9GZY8 342 aa9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 HRH4Q9H3N8 390 aa9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 RBKSQ9H477 322 aa9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 MCUBQ9NWR8 336 aa9.54□□□□□ -0.88
SEMA4D-223ENST00000540475 IGKV1D-37A0A075B6S9 117 aa9.53□□□□□ -0.88
SEMA4D-223ENST00000540475 NOL3O60936 208 aaKnown RBP9.53□□□□□ -0.88
SEMA4D-223ENST00000540475 IL4P05112 153 aa9.53□□□□□ -0.88
SEMA4D-223ENST00000540475 RD3LP0DJH9 198 aa9.53□□□□□ -0.88
SEMA4D-223ENST00000540475 PSG1P11464 419 aa9.53□□□□□ -0.88
SEMA4D-223ENST00000540475 FAUP35544 74 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms