RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 TNFAIP8O95379 198 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 CDS2O95674 445 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 CD74P04233 296 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 P0DMU3 169 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 FAM231AP0DMU4 169 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 FAM231CP0DMU5 169 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 RORCP51449 518 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 SNRPD3P62318 126 aaKnown RBP8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 C12orf74Q32Q52 190 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 MZT2AQ6P582 158 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 PRSS54Q6PEW0 395 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 Q6ZRM9 215 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 RNASE11Q8TAA1 199 aaKnown RBP8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 C15orf40Q8WUR7 153 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 FUNDC2Q9BWH2 189 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 CLEC5AQ9NY25 188 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 CELA1Q9UNI1 258 aa8.65□□□□□ -1.02
CBX3P4-202ENST00000540428 A0A1B0GVY2 172 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 FAM25AB3EWG3 89 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 FAM25CB3EWG5 89 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 FAM25GB3EWG6 89 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 GSTZ1O43708 216 aaPredicted RBP8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 NPY1RP25929 384 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 OR10J1P30954 320 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 RND2P52198 227 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 TAS2R19P59542 299 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 VBP1P61758 197 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 DHODHQ02127 395 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 ETFRF1Q6IPR1 90 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 POM121L12Q8N7R1 296 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 TMEM229BQ8NBD8 167 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 SLC24A4Q8NFF2 622 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 OR13C8Q8NGS7 320 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 OR52I2Q8NH67 350 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 AP3S1Q92572 193 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 ABHD1Q96SE0 405 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 NEU1Q99519 415 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 TMEM222Q9H0R3 208 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 NRN1Q9NPD7 142 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 HEYLQ9NQ87 328 aaPredicted RBP8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 CACFD1Q9UGQ2 172 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 PCLOQ9Y6V0 5065 aa8.64□□□□□ -1.03
CBX3P4-202ENST00000540428 FAM90A26D6RGX4 464 aa8.63□□□□□ -1.03
CBX3P4-202ENST00000540428 H3BMM0 161 aa8.63□□□□□ -1.03
CBX3P4-202ENST00000540428 BUB3O43684 328 aa8.63□□□□□ -1.03
CBX3P4-202ENST00000540428 IL4P05112 153 aa8.63□□□□□ -1.03
CBX3P4-202ENST00000540428 USF2Q15853 346 aaPredicted RBP8.63□□□□□ -1.03
CBX3P4-202ENST00000540428 RNASE12Q5GAN4 147 aaKnown RBP8.63□□□□□ -1.03
CBX3P4-202ENST00000540428 NOXA1Q86UR1 476 aa8.63□□□□□ -1.03
CBX3P4-202ENST00000540428 GLYATL2Q8WU03 294 aa8.63□□□□□ -1.03
CBX3P4-202ENST00000540428 RBPMSQ93062 196 aaKnown RBP8.63□□□□□ -1.03
CBX3P4-202ENST00000540428 NDUFAF3Q9BU61 184 aa8.63□□□□□ -1.03
CBX3P4-202ENST00000540428 AGRNO00468 2067 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 TEX13DA0A0J9YY54 714 aaPredicted RBP8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 TMEM189A5PLL7 270 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 RAB3DO95716 219 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 TOMM40O96008 361 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 OR5AC1P0C628 307 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 MED14OSP0DP75 135 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 NUP62P37198 522 aaPredicted RBP8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 NKX2-1P43699 371 aaPredicted RBP8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 SSBP1Q04837 148 aaKnown RBP8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 SURF2Q15527 256 aaPredicted RBP8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 SCGB2B2Q4G0G5 96 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 STEAP1BQ6NZ63 245 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 SIGLEC15Q6ZMC9 328 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 ZNF705AQ6ZN79 300 aaPredicted RBP8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 OR4D10Q8NGI6 311 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 MARCH1Q8TCQ1 289 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 NAA60Q9H7X0 242 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 XCL2Q9UBD3 114 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 EXTL2Q9UBQ6 330 aa8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 C14orf166Q9Y224 244 aaKnown RBP8.62□□□□□ -1.03
CBX3P4-202ENST00000540428 SMIM9A6NGZ8 99 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 CEBPZOSA8MTT3 80 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 ZNF705FA8MVS1 300 aaPredicted RBP8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 ZNF705DP0CH99 300 aaPredicted RBP8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 ZNF705BP0CI00 300 aaPredicted RBP8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 RD3LP0DJH9 198 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 HLA-DRB4P13762 266 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 ZNF182P17025 639 aaPredicted RBP8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 MEF2DQ14814 521 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 LGALS9BQ3B8N2 356 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 ZNF767PQ75MW2 155 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 SELENOHQ8IZQ5 122 aaKnown RBP8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 LHFPL5Q8TAF8 219 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 NPIPB3Q92617 1050 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 GPR146Q96CH1 333 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 FAM210BQ96KR6 192 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 RTBDNQ9BSG5 229 aaPredicted RBP8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 CACNG5Q9UF02 275 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 PFDN2Q9UHV9 154 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 HLA-DRB4X5D2U9 266 aa8.61□□□□□ -1.03
CBX3P4-202ENST00000540428 TEX48A0A1B0GUV7 120 aa8.6□□□□□ -1.03
CBX3P4-202ENST00000540428 PRSS29PA6NIE9 313 aa8.6□□□□□ -1.03
CBX3P4-202ENST00000540428 GABARAPH6UMI1 98 aa8.6□□□□□ -1.03
CBX3P4-202ENST00000540428 GABARAPO95166 117 aa8.6□□□□□ -1.03
CBX3P4-202ENST00000540428 SPART-AS1P0CW21 52 aa8.6□□□□□ -1.03
CBX3P4-202ENST00000540428 MRPS10P82664 201 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms