RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 C20orf78Q9BR46 151 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 CYSLTR1Q9Y271 337 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 NCKAP5O14513 1909 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 MAP1BP46821 2468 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 MT-ATP8P03928 68 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 RFPL3SP0C7P2 107 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 SUMO3P55854 103 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 PDLIM3Q53GG5 364 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 SPATA46Q5T0L3 261 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 TMEM42Q69YG0 159 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 BOD1L2Q8IYS8 172 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 ZNF611Q8N823 705 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 GGTLC1Q9BX51 225 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 DKK4Q9UBT3 224 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 RAXQ9Y2V3 346 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 MPC1Q9Y5U8 109 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 BOD1L1Q8NFC6 3051 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 A0A1W2PRD5 423 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 A0A1W2PRF3 423 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 A0A1W2PRM7 423 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 EFNA2O43921 213 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 G6PCP35575 357 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 Q6ZR03 302 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 GTSF1Q8WW33 167 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 IL1F10Q8WWZ1 152 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 DDB2Q92466 427 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 GRAMD2BQ96HH9 432 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 ADTRPQ96IZ2 230 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 HS3ST6Q96QI5 342 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 ANAPC13Q9BS18 74 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 NDFIP1Q9BT67 221 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 CDIP1Q9H305 208 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 MBNL3Q9NUK0 354 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 LINC00312Q9Y6C7 94 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 PTPRQQ9UMZ3 2332 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 C15orf62A8K5M9 175 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 SMAD7O15105 426 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 ZIC3O60481 467 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 SP1P08047 785 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 CD24P25063 80 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 RTL8BQ17RB0 113 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 MDS2Q8NDY4 140 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 OR4X2Q8NGF9 303 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 OR9G4Q8NGQ1 327 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 ST8SIA1Q92185 356 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 DPF1Q92782 380 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 SPTSSAQ969W0 71 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 MGST2Q99735 147 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 SPXQ9BT56 116 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 ZNF355PQ9NSJ1 428 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 SIGLEC8Q9NYZ4 499 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 TIMM8BQ9Y5J9 83 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 INSIG2Q9Y5U4 225 aa7.75□□□□□ -1.17
CTNNA1-243ENST00000540387 PRRC2CQ9Y520 2896 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A10PA6NDY2 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A18PA6NE21 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A16PA6NEW6 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A20PA6NIJ5 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A8PA6NJQ4 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A7PA6NKC0 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A22PA8MWA6 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A12PA8MX19 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A5PA8MXJ8 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A23PA8MXZ1 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 CEACAM4O75871 244 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A15PP0C7V4 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A13PP0C7W8 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A14PP0C7W9 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM90A24PP0C7X0 464 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 BCL3P20749 454 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 TM4SF20Q53R12 229 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 NHLRC2Q8NBF2 726 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 UFC1Q9Y3C8 167 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 ZZEF1O43149 2961 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 SYNGR1O43759 233 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 MPDU1O75352 247 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 NCR2O95944 276 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 P0C879 139 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 VDAC2P45880 294 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 DSCR4P56555 118 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 IGFL2Q6UWQ7 119 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 TREML4Q6UXN2 200 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 PIGCQ92535 297 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 TMEM54Q969K7 222 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 IGF2BP2-AS1Q96M15 143 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 IDI2-AS1Q9NZ38 188 aa7.74□□□□□ -1.17
CTNNA1-243ENST00000540387 ATMQ13315 3056 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 ZNF716A6NP11 495 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 K7ENP7 123 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 ZNF138P52744 262 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 TCTAP57738 103 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 EFNB3Q15768 340 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 SLC25A53Q5H9E4 307 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 ZNF766Q5HY98 468 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 MOB1BQ7L9L4 216 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 YRDCQ86U90 279 aaKnown RBP7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 SSMEM1Q8WWF3 244 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM173AQ9BQD7 235 aa7.73□□□□□ -1.17
CTNNA1-243ENST00000540387 RALYQ9UKM9 306 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms