RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 RBPMS2Q6ZRY4 209 aaKnown RBP9.13□□□□□ -0.95
PBX1-212ENST00000540236 TUSC5Q8IXB3 177 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 LRRC29Q8WV35 223 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 CFHR5Q9BXR6 569 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 CFPP27918 469 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 VGLL1Q99990 258 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 TRAV24A0A0B4J272 114 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 PRB3Q04118 309 aaPredicted RBP9.13□□□□□ -0.95
PBX1-212ENST00000540236 TMEM196Q5HYL7 178 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 TMEM14EPQ6UXP3 125 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 AAMDCQ9H7C9 122 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 CCL3P10147 92 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 FAM159AQ6UWV7 190 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 OR9G1Q8NH87 305 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 TRAV40A0A0B4J280 105 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 FAM90A26D6RGX4 464 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 NPIPB6E9PJ23 425 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 NLRC5Q86WI3 1866 aa9.13□□□□□ -0.95
PBX1-212ENST00000540236 TRBV20OR9-2A0A075B6H5 130 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 LTAP01374 205 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 CEND1Q8N111 149 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 CHCHD5Q9BSY4 110 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 A6NJY4 79 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 RASL11AQ6T310 242 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 OR9G4Q8NGQ1 327 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 PRDM6Q9NQX0 595 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 TDRD6O60522 2096 aaKnown RBP9.12□□□□□ -0.95
PBX1-212ENST00000540236 PRR33A8MZF0 331 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 C9JAW5 83 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 M0QXV9 152 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 RPL11P62913 178 aaKnown RBP9.12□□□□□ -0.95
PBX1-212ENST00000540236 C9orf153Q5TBE3 101 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 LOXL2Q9Y4K0 774 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 MDC1Q14676 2089 aaKnown RBP9.12□□□□□ -0.95
PBX1-212ENST00000540236 GAGE12JA6NER3 117 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 C9orf172C9J069 976 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 GAGE7O76087 117 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 GAGE12FP0CL80 117 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 GAGE12GP0CL81 117 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 GAGE12IP0CL82 117 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 GAGE4Q13068 117 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 C1orf210Q8IVY1 113 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 NDFIP1Q9BT67 221 aa9.12□□□□□ -0.95
PBX1-212ENST00000540236 CFIP05156 583 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 TMEM240Q5SV17 173 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 C15orf62A8K5M9 175 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 SYNGR3O43761 229 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 CLPSP04118 112 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 HBDP02042 147 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 ZNF562Q6V9R5 426 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 ERG28Q9UKR5 140 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 EFNA2O43921 213 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 OR13A1Q8NGR1 328 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 DLX4Q92988 240 aaPredicted RBP9.11□□□□□ -0.95
PBX1-212ENST00000540236 DECR2Q9NUI1 292 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 OCIAD1Q9NX40 245 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 IDI2-AS1Q9NZ38 188 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 KLF12Q9Y4X4 402 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 A0A1B0GUT8 65 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 C9JCJ5 164 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 F5H697 171 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 LYZL6O75951 148 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 TNFRSF6BO95407 300 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 SSBP2P81877 361 aaPredicted RBP9.11□□□□□ -0.95
PBX1-212ENST00000540236 Q9H3A6 140 aa9.11□□□□□ -0.95
PBX1-212ENST00000540236 KIAA2026Q5HYC2 2103 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 C12orf77C9JDV5 145 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 KLRC4-KLRK1H3BQV0 150 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 OR1L8Q8NGR8 309 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 MPC1Q9Y5U8 109 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 TCF20Q9UGU0 1960 aaKnown RBP9.1□□□□□ -0.95
PBX1-212ENST00000540236 IGHV3OR16-8A0A075B7F1 116 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 FAM106CPP0CH98 169 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 DSCR4P56555 118 aaPredicted RBP9.1□□□□□ -0.95
PBX1-212ENST00000540236 FAM106AQ4KMX7 169 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 AMN1Q8IY45 258 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 hCG_38984A0A1B0GV85 526 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 TMEM213A2RRL7 107 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 ZNF688P0C7X2 276 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 HLA-DRB4P13762 266 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 CCL1P22362 96 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 EXOC3-AS1Q8N2X6 119 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 ABHD17AQ96GS6 310 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 WDR83OSQ9Y284 106 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 HLA-DRB4X5D2U9 266 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 NPIPB11E5RHQ5 1161 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 IGHV3-23P01764 117 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 RAXQ9Y2V3 346 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 LINC00473A8K010 186 aa9.1□□□□□ -0.95
PBX1-212ENST00000540236 SRSF6Q13247 344 aaKnown RBP9.1□□□□□ -0.95
PBX1-212ENST00000540236 ZNF785A8K8V0 405 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 ARMS2P0C7Q2 107 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 RPS20P60866 119 aaKnown RBP9.09□□□□□ -0.95
PBX1-212ENST00000540236 PIMREGQ9BSJ6 248 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 ZNF815PA8K554 130 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 OR11H12B2RN74 326 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 GGTLC3B5MD39 225 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 OR11H1Q8NG94 326 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
PBX1-212ENST00000540236 SLC25A10Q9UBX3 287 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms