RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 PPOXP50336 477 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 ZADH2Q8N4Q0 377 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 VSTM2AQ8TAG5 236 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 SLC25A33Q9BSK2 321 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 S4R3C0 116 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 CD69Q07108 199 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 TM4SF20Q53R12 229 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 WFDC3Q8IUB2 231 aa10.62□□□□□ -0.71
MSH6-210ENST00000540021 PPIAL4DF5H284 164 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 TNFRSF1AP19438 455 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 TP53TG3Q9ULZ0 132 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 TRAV8-1A0A0A6YYK1 113 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 IGHV1-18A0A0C4DH31 117 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 GAGE10A6NGK3 116 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 CSN1S1P47710 185 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 PRCDQ00LT1 54 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 LRRC10Q5BKY1 277 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 TMEM116Q8NCL8 245 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 PIEZO2Q9H5I5 2752 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 SRRM5B3KS81 715 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 IGLL1P15814 213 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 VWC2Q2TAL6 325 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 AMMECR1LQ6DCA0 310 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 C12orf54Q6X4T0 127 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 HSPB8Q9UJY1 196 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 RNF114Q9Y508 228 aa10.61□□□□□ -0.71
MSH6-210ENST00000540021 F11RQ9Y624 299 aaKnown RBP10.61□□□□□ -0.71
MSH6-210ENST00000540021 FRYQ5TBA9 3013 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 C10orf142B7Z368 130 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 COMPP49747 757 aaPredicted RBP10.6□□□□□ -0.71
MSH6-210ENST00000540021 UBE2V1Q13404 147 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 Q8TCH9 128 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 MRPL32Q9BYC8 188 aaKnown RBP10.6□□□□□ -0.71
MSH6-210ENST00000540021 TP73-AS1Q9UF72 201 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 NBEAQ8NFP9 2946 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 WDFY3Q8IZQ1 3526 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 A0A087X0K7 114 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 ZNF714Q96N38 554 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 PRR33A8MZF0 331 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 HLA-DRB1P01911 266 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 TDGF1P13385 188 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 ARF6P62330 175 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 C11orf53Q8IXP5 236 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 HILPDAQ9Y5L2 63 aa10.6□□□□□ -0.71
MSH6-210ENST00000540021 C15orf65H3BRN8 121 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 CCL25O15444 150 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 FXYD7P58549 80 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 UTF1Q5T230 341 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 OR4F17Q8NGA8 305 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 RNASE8Q8TDE3 154 aaKnown RBP10.59□□□□□ -0.71
MSH6-210ENST00000540021 C19orf24Q9BVV8 132 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 RPP21Q9H633 154 aaKnown RBP10.59□□□□□ -0.71
MSH6-210ENST00000540021 FOXA2Q9Y261 457 aaPredicted RBP10.59□□□□□ -0.71
MSH6-210ENST00000540021 COX11Q9Y6N1 276 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 NAV3Q8IVL0 2385 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 TANC2Q9HCD6 1990 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 K7ERU9 68 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 FAM87AP0C7U9 286 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 ACP1P24666 158 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 FAM90A1Q86YD7 464 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 STXBP6Q8NFX7 210 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 PRR7Q8TB68 274 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 APOHP02749 345 aaPredicted RBP10.59□□□□□ -0.71
MSH6-210ENST00000540021 KIR2DL2P43627 348 aaPredicted RBP10.59□□□□□ -0.71
MSH6-210ENST00000540021 GAGE1Q13065 139 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 SCGB2A2Q13296 93 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 SPACA3Q8IXA5 215 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 RASL11BQ9BPW5 248 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 PPP1R14DQ9NXH3 145 aa10.59□□□□□ -0.71
MSH6-210ENST00000540021 TRGV8A0A0C4DH27 118 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 RELQ04864 619 aaPredicted RBP10.58□□□□□ -0.72
MSH6-210ENST00000540021 SRSF6Q13247 344 aaKnown RBP10.58□□□□□ -0.72
MSH6-210ENST00000540021 GPR82Q96P67 336 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 AP5S1Q9NUS5 200 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 PROP1O75360 226 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 MMP23AO75900 390 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 RPL27AP46776 148 aaKnown RBP10.58□□□□□ -0.72
MSH6-210ENST00000540021 MORN5Q5VZ52 161 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 HIGD1AQ9Y241 93 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 MALRD1Q5VYJ5 2156 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 PSG1P11464 419 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 ARL3P36405 182 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 FAM27E3Q08E93 113 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 RIGQ13278 110 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 OR4C13Q8NGP0 309 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 CHODLQ9H9P2 273 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 GP6Q9HCN6 339 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 EPDR1Q9UM22 224 aa10.58□□□□□ -0.72
MSH6-210ENST00000540021 SS18L1O75177 396 aaPredicted RBP10.57□□□□□ -0.72
MSH6-210ENST00000540021 C5orf17Q8NAS9 161 aa10.57□□□□□ -0.72
MSH6-210ENST00000540021 LY96Q9Y6Y9 160 aa10.57□□□□□ -0.72
MSH6-210ENST00000540021 OR2T8A6NH00 312 aa10.57□□□□□ -0.72
MSH6-210ENST00000540021 FAM90A9PA6NNJ1 464 aa10.57□□□□□ -0.72
MSH6-210ENST00000540021 LIPFP07098 398 aa10.57□□□□□ -0.72
MSH6-210ENST00000540021 SPRNQ5BIV9 151 aa10.57□□□□□ -0.72
MSH6-210ENST00000540021 SP5Q6BEB4 398 aaPredicted RBP10.57□□□□□ -0.72
MSH6-210ENST00000540021 CIARTQ8N365 385 aaPredicted RBP10.57□□□□□ -0.72
MSH6-210ENST00000540021 FNDC4Q9H6D8 234 aaPredicted RBP10.57□□□□□ -0.72
MSH6-210ENST00000540021 HIF1ANQ9NWT6 349 aa10.57□□□□□ -0.72
MSH6-210ENST00000540021 INSIG2Q9Y5U4 225 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms