RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 OR9G1Q8NH87 305 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 C18orf15Q96N68 181 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 K7ENP7 123 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 EFNB3Q15768 340 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 FAM90A2PQ658T7 463 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 WDR82Q6UXN9 313 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 LINC01551Q86U37 167 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 MIEN1Q9BRT3 115 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 KLK15Q9H2R5 256 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 RAXQ9Y2V3 346 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 TRBV9A0A0B4J1U6 114 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 A0A1B0GUS0 222 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 MGPP08493 103 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 GNG5P63218 68 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 TCF24Q7RTU0 167 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 WFDC3Q8IUB2 231 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 ZNF664Q8N3J9 261 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 OR5R1Q8NH85 324 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 PRDM13Q9H4Q3 707 aa8.25□□□□□ -1.09
TRAF1-202ENST00000540010 CACNA1AO00555 2505 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 FAM208BQ5VWN6 2430 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 IGLV1-44P01699 117 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 GLRXP35754 106 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 HBBP68871 147 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 MORN2Q502X0 79 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 TREML4Q6UXN2 200 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 MYOZ3Q8TDC0 251 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 GTF3AQ92664 365 aaKnown RBP8.24□□□□□ -1.09
TRAF1-202ENST00000540010 SEPSECSQ9HD40 501 aaKnown RBP8.24□□□□□ -1.09
TRAF1-202ENST00000540010 TMEM242Q9NWH2 141 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 LAMTOR2Q9Y2Q5 125 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 MSRB2Q9Y3D2 182 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 IL4P05112 153 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 DUTP33316 252 aaKnown RBP8.24□□□□□ -1.09
TRAF1-202ENST00000540010 TM4SF20Q53R12 229 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 C2orf83Q53S99 150 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 PRR30Q53SZ7 412 aaPredicted RBP8.24□□□□□ -1.09
TRAF1-202ENST00000540010 SPATA31B1PQ5VZV4 182 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 DCAF16Q9NXF7 216 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 SAA2-SAA4A0A096LPE2 208 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 PEX7O00628 323 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 SAA2P0DJI9 122 aaPredicted RBP8.24□□□□□ -1.09
TRAF1-202ENST00000540010 Q6P435 159 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 ZNF502Q8TBZ5 544 aa8.24□□□□□ -1.09
TRAF1-202ENST00000540010 KBTBD11-OT1A0A1B0GTJ5 212 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 CIDEAO60543 219 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 UCNP55089 124 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 C19orf24Q9BVV8 132 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 METRNQ9UJH8 293 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 LOC400499M0QZD8 3231 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 TRAV1-1A0A0B4J248 108 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 IGKV1-6A0A0C4DH72 117 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 A0A0G2JNJ9 132 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 ZNF207O43670 478 aaKnown RBP8.23□□□□□ -1.09
TRAF1-202ENST00000540010 Q6ZR03 302 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 TMEM144Q7Z5S9 345 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 OR10W1Q8NGF6 305 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 FBXL15Q9H469 300 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 Q9UFV3 132 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 IGHV3-49A0A0A0MS15 119 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 TRAV3A0A0B4J244 114 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 GZMBP10144 247 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 CEACAM8P31997 349 aaPredicted RBP8.23□□□□□ -1.09
TRAF1-202ENST00000540010 PLP1P60201 277 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 Q6ZPA2 131 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 TMEM136Q6ZRR5 245 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 OR10AG1Q8NH19 301 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 MRPL20Q9BYC9 149 aaKnown RBP8.23□□□□□ -1.09
TRAF1-202ENST00000540010 C1RLQ9NZP8 487 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 ANKRD11Q6UB99 2663 aaPredicted RBP8.23□□□□□ -1.09
TRAF1-202ENST00000540010 MGAQ8IWI9 3026 aa8.23□□□□□ -1.09
TRAF1-202ENST00000540010 TRAV5A0A0B4J249 113 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 SRSF7Q16629 238 aaKnown RBP eCLIP8.22□□□□□ -1.09
TRAF1-202ENST00000540010 KIR3DL3Q8N743 410 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 OR52E5Q8NH55 327 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 GGTLC1Q9BX51 225 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 AKAP13Q12802 2813 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 DYSFO75923 2080 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 SAA1P0DJI8 122 aaPredicted RBP8.22□□□□□ -1.09
TRAF1-202ENST00000540010 MYOD1P15172 320 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 C10orf55Q5SWW7 151 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 FAM53AQ6NSI3 398 aaPredicted RBP8.22□□□□□ -1.09
TRAF1-202ENST00000540010 TMEM14EPQ6UXP3 125 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 ACACBO00763 2458 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 F2RL2O00254 374 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 PSMB2P49721 201 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 ERVK11-1P61568 191 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 DAZAP2Q15038 168 aaPredicted RBP8.22□□□□□ -1.09
TRAF1-202ENST00000540010 Q6ZS49 121 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 ARL6IP6Q8N6S5 226 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 FAM169BQ8N8A8 192 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 MRPL32Q9BYC8 188 aaKnown RBP8.22□□□□□ -1.09
TRAF1-202ENST00000540010 C7orf71A4D174 169 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 LINC00473A8K010 186 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 LCN12Q6JVE5 192 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 AGMATQ9BSE5 352 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 RABAC1Q9UI14 185 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 CDC42EP3Q9UKI2 254 aa8.22□□□□□ -1.09
TRAF1-202ENST00000540010 A0A1B0GW64 132 aa8.21□□□□□ -1.09
TRAF1-202ENST00000540010 H3BVH4 76 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms