RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 KIR2DL5BA0A0G2JN68 375 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 KIR2DL5BA0A0G2JPC4 375 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 ZNF727A8MUV8 499 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 FNDC10F2Z333 226 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 BRS3P32247 399 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 RPL27AP46776 148 aaKnown RBP13.5□□□□□ -0.25
COPS3-212ENST00000539941 COMPP49747 757 aaPredicted RBP13.5□□□□□ -0.25
COPS3-212ENST00000539941 SERF2P84101 59 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 RUNX1Q01196 453 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 PRSS57Q6UWY2 283 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 TMEM182Q6ZP80 229 aaPredicted RBP13.5□□□□□ -0.25
COPS3-212ENST00000539941 CENPVQ7Z7K6 275 aaPredicted RBP13.5□□□□□ -0.25
COPS3-212ENST00000539941 KIR2DL5AQ8N109 375 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 IGHV1-69DA0A0B4J2H0 117 aa13.49□□□□□ -0.25
COPS3-212ENST00000539941 CGB1A6NKQ9 187 aa13.49□□□□□ -0.25
COPS3-212ENST00000539941 IGHV1-69P01742 117 aa13.49□□□□□ -0.25
COPS3-212ENST00000539941 RNASE2P10153 161 aaKnown RBP13.49□□□□□ -0.25
COPS3-212ENST00000539941 MDKP21741 143 aaPredicted RBP13.49□□□□□ -0.25
COPS3-212ENST00000539941 TNXAQ16473 311 aa13.49□□□□□ -0.25
COPS3-212ENST00000539941 ZNF343Q6P1L6 599 aa13.49□□□□□ -0.25
COPS3-212ENST00000539941 Q8N6K4 173 aa13.49□□□□□ -0.25
COPS3-212ENST00000539941 LINC01356Q8N9X3 169 aa13.49□□□□□ -0.25
COPS3-212ENST00000539941 FBXL15Q9H469 300 aa13.49□□□□□ -0.25
COPS3-212ENST00000539941 ZNF705GA8MUZ8 300 aaPredicted RBP13.48□□□□□ -0.25
COPS3-212ENST00000539941 E7EUB6 86 aa13.48□□□□□ -0.25
COPS3-212ENST00000539941 MPDU1O75352 247 aa13.48□□□□□ -0.25
COPS3-212ENST00000539941 SUB1P53999 127 aaKnown RBP eCLIP13.48□□□□□ -0.252e-14■■■■■ 68.6
COPS3-212ENST00000539941 RANP62826 216 aaKnown RBP13.48□□□□□ -0.25
COPS3-212ENST00000539941 HES1Q14469 280 aa13.48□□□□□ -0.25
COPS3-212ENST00000539941 PLGLAQ15195 96 aa13.48□□□□□ -0.25
COPS3-212ENST00000539941 C10orf55Q5SWW7 151 aa13.48□□□□□ -0.25
COPS3-212ENST00000539941 OR10W1Q8NGF6 305 aa13.48□□□□□ -0.25
COPS3-212ENST00000539941 SRSF8Q9BRL6 282 aaKnown RBP13.48□□□□□ -0.25
COPS3-212ENST00000539941 WDR83OSQ9Y284 106 aa13.48□□□□□ -0.25
COPS3-212ENST00000539941 ANKRD17O75179 2603 aaKnown RBP13.48□□□□□ -0.25
COPS3-212ENST00000539941 TEP1Q99973 2627 aaKnown RBP13.48□□□□□ -0.25
COPS3-212ENST00000539941 SOX15O60248 233 aa13.47□□□□□ -0.25
COPS3-212ENST00000539941 FAM106CPP0CH98 169 aa13.47□□□□□ -0.25
COPS3-212ENST00000539941 Q5PR19 223 aa13.47□□□□□ -0.25
COPS3-212ENST00000539941 CYB5R2Q6BCY4 276 aa13.47□□□□□ -0.25
COPS3-212ENST00000539941 ATG101Q9BSB4 218 aa13.47□□□□□ -0.25
COPS3-212ENST00000539941 RSG1Q9BU20 258 aa13.47□□□□□ -0.25
COPS3-212ENST00000539941 HIF1ANQ9NWT6 349 aa13.47□□□□□ -0.25
COPS3-212ENST00000539941 HIVEP1P15822 2718 aa13.47□□□□□ -0.25
COPS3-212ENST00000539941 WT1-ASQ06250 92 aa13.47□□□□□ -0.25
COPS3-212ENST00000539941 ACOT6Q3I5F7 207 aaPredicted RBP13.47□□□□□ -0.25
COPS3-212ENST00000539941 PIP4P2Q8N4L2 257 aa13.47□□□□□ -0.25
COPS3-212ENST00000539941 ZNF114Q8NC26 417 aa13.47□□□□□ -0.25
COPS3-212ENST00000539941 C7orf69Q9H7B7 122 aa13.47□□□□□ -0.25
COPS3-212ENST00000539941 IGLC7A0M8Q6 106 aa13.46□□□□□ -0.26
COPS3-212ENST00000539941 C17orf112F2Z3M2 114 aa13.46□□□□□ -0.26
COPS3-212ENST00000539941 J3QLI3 93 aa13.46□□□□□ -0.26
COPS3-212ENST00000539941 ICAM4Q14773 271 aa13.46□□□□□ -0.26
COPS3-212ENST00000539941 C5orf64Q2M2E5 130 aa13.46□□□□□ -0.26
COPS3-212ENST00000539941 ZNF709Q8N972 641 aa13.46□□□□□ -0.26
COPS3-212ENST00000539941 BTF3L4Q96K17 158 aa13.46□□□□□ -0.26
COPS3-212ENST00000539941 NPVFQ9HCQ7 196 aa13.46□□□□□ -0.26
COPS3-212ENST00000539941 C1RLQ9NZP8 487 aa13.46□□□□□ -0.26
COPS3-212ENST00000539941 URGCP-MRPS24S4R325 110 aa13.46□□□□□ -0.26
COPS3-212ENST00000539941 TRAV1-1A0A0B4J248 108 aa13.45□□□□□ -0.26
COPS3-212ENST00000539941 TRAV40A0A0B4J280 105 aa13.45□□□□□ -0.26
COPS3-212ENST00000539941 TMEM11P17152 192 aa13.45□□□□□ -0.26
COPS3-212ENST00000539941 OR10J1P30954 320 aa13.45□□□□□ -0.26
COPS3-212ENST00000539941 TMEM241Q24JQ0 296 aa13.45□□□□□ -0.26
COPS3-212ENST00000539941 CACNG8Q8WXS5 425 aa13.45□□□□□ -0.26
COPS3-212ENST00000539941 RARRES2Q99969 163 aa13.45□□□□□ -0.26
COPS3-212ENST00000539941 PYGO2Q9BRQ0 406 aa13.45□□□□□ -0.26
COPS3-212ENST00000539941 NPCDR1Q9BY65 106 aa13.45□□□□□ -0.26
COPS3-212ENST00000539941 RFNGQ9Y644 331 aa13.45□□□□□ -0.26
COPS3-212ENST00000539941 A0A1W2PPQ1 181 aa13.44□□□□□ -0.26
COPS3-212ENST00000539941 CD24P25063 80 aa13.44□□□□□ -0.26
COPS3-212ENST00000539941 GNB1P62873 340 aa13.44□□□□□ -0.26
COPS3-212ENST00000539941 PVRIGQ6DKI7 326 aa13.44□□□□□ -0.26
COPS3-212ENST00000539941 SPSB3Q6PJ21 355 aa13.44□□□□□ -0.26
COPS3-212ENST00000539941 TREML4Q6UXN2 200 aa13.44□□□□□ -0.26
COPS3-212ENST00000539941 OR4X1Q8NH49 305 aa13.44□□□□□ -0.26
COPS3-212ENST00000539941 SRSF12Q8WXF0 261 aaKnown RBP13.44□□□□□ -0.26
COPS3-212ENST00000539941 KCNIP2Q9NS61 270 aa13.44□□□□□ -0.26
COPS3-212ENST00000539941 MAP1AP78559 2803 aaPredicted RBP13.44□□□□□ -0.26
COPS3-212ENST00000539941 TEX22C9J3V5 150 aa13.44□□□□□ -0.26
COPS3-212ENST00000539941 SSBP2P81877 361 aaPredicted RBP13.44□□□□□ -0.26
COPS3-212ENST00000539941 ARSJQ5FYB0 599 aaPredicted RBP13.44□□□□□ -0.26
COPS3-212ENST00000539941 P2RX4Q99571 388 aa13.44□□□□□ -0.26
COPS3-212ENST00000539941 MEGF9Q9H1U4 602 aa13.44□□□□□ -0.26
COPS3-212ENST00000539941 LSM4Q9Y4Z0 139 aaKnown RBP13.44□□□□□ -0.26
COPS3-212ENST00000539941 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.43□□□□□ -0.263e-6■■■■■ 29.1
COPS3-212ENST00000539941 XKRY2A2RUG3 117 aa13.43□□□□□ -0.26
COPS3-212ENST00000539941 RNF223E7ERA6 249 aa13.43□□□□□ -0.26
COPS3-212ENST00000539941 FCN1O00602 326 aa13.43□□□□□ -0.26
COPS3-212ENST00000539941 CNIH1O95406 144 aa13.43□□□□□ -0.26
COPS3-212ENST00000539941 FHITP49789 147 aa13.43□□□□□ -0.26
COPS3-212ENST00000539941 FAM3BP58499 235 aaPredicted RBP13.43□□□□□ -0.26
COPS3-212ENST00000539941 CD69Q07108 199 aa13.43□□□□□ -0.26
COPS3-212ENST00000539941 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
COPS3-212ENST00000539941 CYB561D1Q8N8Q1 229 aa13.43□□□□□ -0.26
COPS3-212ENST00000539941 RAB31Q13636 194 aa13.42□□□□□ -0.26
COPS3-212ENST00000539941 RUSC1-AS1Q66K80 236 aa13.42□□□□□ -0.26
COPS3-212ENST00000539941 TEPPQ6URK8 271 aa13.42□□□□□ -0.26
COPS3-212ENST00000539941 ZNF562Q6V9R5 426 aa13.42□□□□□ -0.26
COPS3-212ENST00000539941 IMMP2LQ96T52 175 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms