RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 MGST1P10620 155 aaKnown RBP5□□□□□ -1.61
SNHG1-211ENST00000539921 CD70P32970 193 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 RPL13AP40429 203 aaKnown RBP5□□□□□ -1.61
SNHG1-211ENST00000539921 FOXA3P55318 350 aaPredicted RBP5□□□□□ -1.61
SNHG1-211ENST00000539921 UBE2D3P61077 147 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 UBE2D2P62837 147 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 TFF3Q07654 80 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 C12orf74Q32Q52 190 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 TMEM196Q5HYL7 178 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 GDF5OSQ5U4N7 250 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 FAM159AQ6UWV7 190 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 RNF144BQ7Z419 303 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 PDPNQ86YL7 162 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 C1orf162Q8NEQ5 155 aaPredicted RBP5□□□□□ -1.61
SNHG1-211ENST00000539921 ZC2HC1AQ96GY0 325 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 CYYR1Q96J86 154 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 PRADC1Q9BSG0 188 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 ZNF442Q9H7R0 627 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 IL23AQ9NPF7 189 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 CCL28Q9NRJ3 127 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 HIGD1AQ9Y241 93 aa5□□□□□ -1.61
SNHG1-211ENST00000539921 LOC102723996A0A087X1L8 192 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 TMED7-TICAM2A0A0A6YYA0 188 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 A0A1W2PQF6 199 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 LINC01546A6NGU7 62 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 HIGD1CA8MV81 97 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 RRHO14718 337 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 CLDN14O95500 239 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 IL4P05112 153 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 FKBP2P26885 142 aaKnown RBP4.99□□□□□ -1.61
SNHG1-211ENST00000539921 PPIFP30405 207 aaKnown RBP4.99□□□□□ -1.61
SNHG1-211ENST00000539921 DSCR4P56555 118 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-211ENST00000539921 HHEXQ03014 270 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 POM121L1PQ3SYA9 428 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 KLF17Q5JT82 389 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-211ENST00000539921 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.99□□□□□ -1.61
SNHG1-211ENST00000539921 ACP7Q6ZNF0 438 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 LINC00173Q6ZV60 143 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 NFE4Q86UQ8 179 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 ZDHHC23Q8IYP9 409 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 GJC3Q8NFK1 279 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 OR1L4Q8NGR5 311 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 IFI27L1Q96BM0 104 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 BORCS8Q96FH0 119 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 LINC00526Q96FQ7 95 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 ZNF414Q96IQ9 312 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 LYZL4Q96KX0 146 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 NAA38Q9BRA0 125 aaKnown RBP4.99□□□□□ -1.61
SNHG1-211ENST00000539921 PRSS22Q9GZN4 317 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 RNASE7Q9H1E1 156 aaKnown RBP4.99□□□□□ -1.61
SNHG1-211ENST00000539921 C7orf69Q9H7B7 122 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 NHP2Q9NX24 153 aaKnown RBP4.99□□□□□ -1.61
SNHG1-211ENST00000539921 TCF19Q9Y242 345 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 MSRB2Q9Y3D2 182 aa4.99□□□□□ -1.61
SNHG1-211ENST00000539921 TCF20Q9UGU0 1960 aaKnown RBP4.98□□□□□ -1.61
SNHG1-211ENST00000539921 SHANK1Q9Y566 2161 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 TRBV25-1A0A075B6N4 114 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 TRGV8A0A0C4DH27 118 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 ZNF816-ZNF321PA0A0X1KG74 233 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 SRRM4A7MD48 611 aaKnown RBP4.98□□□□□ -1.61
SNHG1-211ENST00000539921 PRSS46E5RG02 174 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 DLL1O00548 723 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 HBDP02042 147 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 SCGB1C2P0DMR2 95 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 BCL3P20749 454 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 NMUP48645 174 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 FOXE3Q13461 319 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 MLF2Q15773 248 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-211ENST00000539921 MS4A18Q3C1V0 323 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 DEFB134Q4QY38 66 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 C2orf27AQ580R0 203 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 PRR31Q5SQ13 230 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 Q6ZPA2 131 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 SLC25A48Q6ZT89 311 aaKnown RBP4.98□□□□□ -1.61
SNHG1-211ENST00000539921 FAM19A5Q7Z5A7 132 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-211ENST00000539921 FGFRL1Q8N441 504 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 BAALCQ8WXS3 180 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 SNRNP40Q96DI7 357 aaKnown RBP4.98□□□□□ -1.61
SNHG1-211ENST00000539921 AJUBAQ96IF1 538 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 TMEM101Q96IK0 257 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 CARD19Q96LW7 228 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 C18orf15Q96N68 181 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 DUX3Q96PT4 197 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 HSD17B10Q99714 261 aaKnown RBP4.98□□□□□ -1.61
SNHG1-211ENST00000539921 PIMREGQ9BSJ6 248 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 RPP21Q9H633 154 aaKnown RBP4.98□□□□□ -1.61
SNHG1-211ENST00000539921 ENY2Q9NPA8 101 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 PRDM6Q9NQX0 595 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 PROCRQ9UNN8 238 aa4.98□□□□□ -1.61
SNHG1-211ENST00000539921 ATG2BQ96BY7 2078 aa4.97□□□□□ -1.61
SNHG1-211ENST00000539921 TRBV6-1A0A0K0K1D8 114 aa4.97□□□□□ -1.61
SNHG1-211ENST00000539921 MYMXA0A1B0GTQ4 84 aa4.97□□□□□ -1.61
SNHG1-211ENST00000539921 OTOL1A6NHN0 477 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-211ENST00000539921 MS4A18H0YCH9 400 aa4.97□□□□□ -1.61
SNHG1-211ENST00000539921 CHEK1O14757 476 aa4.97□□□□□ -1.61
SNHG1-211ENST00000539921 ATP5LO75964 103 aa4.97□□□□□ -1.61
SNHG1-211ENST00000539921 NPYP01303 97 aa4.97□□□□□ -1.61
SNHG1-211ENST00000539921 MYF5P13349 255 aa4.97□□□□□ -1.61
SNHG1-211ENST00000539921 TMEM258P61165 79 aa4.97□□□□□ -1.61
SNHG1-211ENST00000539921 FGF12P61328 243 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms