RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 HIST1H1EP10412 219 aaKnown RBP7.81□□□□□ -1.16
CDH13-204ENST00000539548 WT1-ASQ06250 92 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 ASCL5Q7RTU5 278 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 ATP5L2Q7Z4Y8 100 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 C11orf42Q8N5U0 333 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 OR8B3Q8NGG8 313 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 NPIPB3Q92617 1050 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 SMIM12Q96EX1 92 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 RBM14Q96PK6 669 aaKnown RBP7.81□□□□□ -1.16
CDH13-204ENST00000539548 OR8B2Q96RD0 313 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 SAP30LQ9HAJ7 183 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 TNFRSF19Q9NS68 423 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 KLF12Q9Y4X4 402 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 GPR179Q6PRD1 2367 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 FAM181BA6NEQ2 426 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 CGB1A6NKQ9 187 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 WT1P19544 449 aaPredicted RBP7.8□□□□□ -1.16
CDH13-204ENST00000539548 STXBP6Q8NFX7 210 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 VSTM2AQ8TAG5 236 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 EPDR1Q9UM22 224 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 GVINP1Q7Z2Y8 2422 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 DMXL1Q9Y485 3027 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 TRAV9-2A0A087WT02 112 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 A0A1B0GXF2 115 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 NKX6-3A6NJ46 265 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 SIAH2O43255 324 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 NDUFB8O95169 186 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 TSPOP30536 169 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 ASPHD1Q5U4P2 390 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 DMRTA1Q5VZB9 504 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 LCN12Q6JVE5 192 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 FAM71F2Q6NXP2 309 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 EBLN2Q6P2I7 272 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 PDPNQ86YL7 162 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 ZCCHC24Q8N2G6 241 aaKnown RBP7.8□□□□□ -1.16
CDH13-204ENST00000539548 OR4C13Q8NGP0 309 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 DCAF16Q9NXF7 216 aa7.8□□□□□ -1.16
CDH13-204ENST00000539548 C2orf70A6NJV1 201 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 HIGD1CA8MV81 97 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 M0R2Z0 102 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 NBL1P41271 181 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 UBE2G1P62253 170 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 FAM162BQ5T6X4 162 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 ZNF841Q6ZN19 808 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 RBMXL3Q8N7X1 1067 aaKnown RBP7.79□□□□□ -1.16
CDH13-204ENST00000539548 C8orf31Q8N9H6 132 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 ZNF596Q8TC21 504 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 ORAOV1Q8WV07 137 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 ASCL3Q9NQ33 180 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 CBY1Q9Y3M2 126 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 PPIAL4AQ9Y536 164 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 FAM215AQ9Y5M1 114 aa7.79□□□□□ -1.16
CDH13-204ENST00000539548 IGHV2-26A0A0B4J1V2 119 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 VWC2LB2RUY7 222 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 CORTO00230 105 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 CEACAM4O75871 244 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 IGLV2-23P01705 113 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 CA7P43166 264 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 GPR6P46095 362 aaPredicted RBP7.78□□□□□ -1.16
CDH13-204ENST00000539548 MAJINQ3KP22 176 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 TMEM200BQ69YZ2 307 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 PRR27Q6MZM9 219 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 LINC00305Q7Z4B0 112 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 ATOH7Q8N100 152 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 LINC00311Q8N616 119 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 PERPQ96FX8 193 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 MLST8Q9BVC4 326 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 MRPL36Q9P0J6 103 aaKnown RBP7.78□□□□□ -1.16
CDH13-204ENST00000539548 EP300Q09472 2414 aaPredicted RBP7.78□□□□□ -1.16
CDH13-204ENST00000539548 SLC25A5P05141 298 aaKnown RBP7.78□□□□□ -1.16
CDH13-204ENST00000539548 CRYGCP07315 174 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 CCL3L1P16619 93 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 TNFRSF1AP19438 455 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 CD40P25942 277 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 CAMPP49913 170 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 GNG5P63218 68 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 DEFB109BQ30KR1 87 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 C1orf185Q5T7R7 199 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 PVRIGQ6DKI7 326 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 ETFRF1Q6IPR1 90 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 RNASEKQ6P5S7 137 aaKnown RBP7.78□□□□□ -1.16
CDH13-204ENST00000539548 ZADH2Q8N4Q0 377 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 NUP37Q8NFH4 326 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 TMEM186Q96B77 213 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 GPR82Q96P67 336 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 SSBP4Q9BWG4 385 aaPredicted RBP7.78□□□□□ -1.16
CDH13-204ENST00000539548 PRSS22Q9GZN4 317 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 SSUH2Q9Y2M2 353 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 WASHC3Q9Y3C0 194 aa7.78□□□□□ -1.16
CDH13-204ENST00000539548 PGPA6NDG6 321 aa7.77□□□□□ -1.17
CDH13-204ENST00000539548 REG1BP48304 166 aa7.77□□□□□ -1.17
CDH13-204ENST00000539548 CT83Q5H943 113 aa7.77□□□□□ -1.17
CDH13-204ENST00000539548 C10orf55Q5SWW7 151 aa7.77□□□□□ -1.17
CDH13-204ENST00000539548 C22orf34Q6ZV56 151 aa7.77□□□□□ -1.17
CDH13-204ENST00000539548 RPRMLQ8N4K4 120 aa7.77□□□□□ -1.17
CDH13-204ENST00000539548 ST6GALNAC6Q969X2 333 aa7.77□□□□□ -1.17
CDH13-204ENST00000539548 URB1-AS1Q96HZ7 61 aa7.77□□□□□ -1.17
CDH13-204ENST00000539548 C1RLQ9NZP8 487 aa7.77□□□□□ -1.17
CDH13-204ENST00000539548 ZNF492Q9P255 531 aa7.77□□□□□ -1.17
CDH13-204ENST00000539548 SOX21Q9Y651 276 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms