RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 IL17DQ8TAD2 202 aa11.06□□□□□ -0.64
RAB40B-202ENST00000538809 RNASEH2CQ8TDP1 164 aaKnown RBP11.06□□□□□ -0.64
RAB40B-202ENST00000538809 DNAH1Q9P2D7 4330 aa11.06□□□□□ -0.64
RAB40B-202ENST00000538809 A0A0J9YWU9 116 aa11.05□□□□□ -0.64
RAB40B-202ENST00000538809 SPRY2O43597 315 aa11.05□□□□□ -0.64
RAB40B-202ENST00000538809 DFFBO76075 338 aa11.05□□□□□ -0.64
RAB40B-202ENST00000538809 IGLC1P0CG04 106 aa11.05□□□□□ -0.64
RAB40B-202ENST00000538809 NPY1RP25929 384 aa11.05□□□□□ -0.64
RAB40B-202ENST00000538809 BMI1P35226 326 aa11.05□□□□□ -0.64
RAB40B-202ENST00000538809 STPG3Q8N7X2 389 aa11.05□□□□□ -0.64
RAB40B-202ENST00000538809 RBKSQ9H477 322 aa11.05□□□□□ -0.64
RAB40B-202ENST00000538809 PLECQ15149 4684 aaKnown RBP11.05□□□□□ -0.64
RAB40B-202ENST00000538809 KIR2DL5BA0A0G2JN68 375 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 KIR2DL5BA0A0G2JPC4 375 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 RPS10-NUDT3A0A1W2PQS6 291 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 UBE2CO00762 179 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 SFT2D2O95562 160 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 SLC25A4P12235 298 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 RND2P52198 227 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 RPL11P62913 178 aaKnown RBP11.04□□□□□ -0.64
RAB40B-202ENST00000538809 EWSR1Q01844 656 aaKnown RBP eCLIP11.04□□□□□ -0.64
RAB40B-202ENST00000538809 PPP1R1AQ13522 171 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 RBMS2Q15434 407 aaKnown RBP11.04□□□□□ -0.64
RAB40B-202ENST00000538809 Q6ZWC4 215 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 LYG2Q86SG7 212 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 KIR2DL5AQ8N109 375 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 KIR2DL5BQ8NHK3 375 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 DTD1Q8TEA8 209 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 MS4A6AQ9H2W1 248 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 TP53TG1Q9Y2A0 90 aa11.04□□□□□ -0.64
RAB40B-202ENST00000538809 TRAV30A0A087WSZ9 112 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 PIGBOS1A0A0B4J2F0 54 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 DNASE2O00115 360 aaPredicted RBP11.03□□□□□ -0.64
RAB40B-202ENST00000538809 SCGB2A1O75556 95 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 SLC25A6P12236 298 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 NPPCP23582 126 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 CRYBB3P26998 211 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 BTCP35070 178 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 PAFAH1B2P68402 229 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 PMS2P11Q13670 270 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 CENPSQ8N2Z9 138 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 FAM24BQ8N5W8 94 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 OR1S2Q8NGQ3 325 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 RNF183Q96D59 192 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 METTL26Q96S19 204 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 TMEM231Q9H6L2 316 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 RABAC1Q9UI14 185 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 U3KQ87 197 aa11.03□□□□□ -0.64
RAB40B-202ENST00000538809 NAP1L6A6NFF2 107 aa11.02□□□□□ -0.65
RAB40B-202ENST00000538809 NDUFB6O95139 128 aa11.02□□□□□ -0.65
RAB40B-202ENST00000538809 CD5P06127 495 aa11.02□□□□□ -0.65
RAB40B-202ENST00000538809 VAMP1P23763 118 aa11.02□□□□□ -0.65
RAB40B-202ENST00000538809 UBE2MP61081 183 aaKnown RBP11.02□□□□□ -0.65
RAB40B-202ENST00000538809 YPEL3P61236 119 aaPredicted RBP11.02□□□□□ -0.65
RAB40B-202ENST00000538809 LEMD1Q68G75 181 aa11.02□□□□□ -0.65
RAB40B-202ENST00000538809 NOXA1Q86UR1 476 aa11.02□□□□□ -0.65
RAB40B-202ENST00000538809 STXBP6Q8NFX7 210 aa11.02□□□□□ -0.65
RAB40B-202ENST00000538809 OR1S1Q8NH92 325 aa11.02□□□□□ -0.65
RAB40B-202ENST00000538809 NDUFA13Q9P0J0 144 aa11.02□□□□□ -0.65
RAB40B-202ENST00000538809 U3KQE9 123 aa11.02□□□□□ -0.65
RAB40B-202ENST00000538809 CXorf65A6NEN9 183 aa11.01□□□□□ -0.65
RAB40B-202ENST00000538809 JTBO76095 146 aa11.01□□□□□ -0.65
RAB40B-202ENST00000538809 IFNA10P01566 189 aa11.01□□□□□ -0.65
RAB40B-202ENST00000538809 OR10J1P30954 320 aa11.01□□□□□ -0.65
RAB40B-202ENST00000538809 P2RY1P47900 373 aa11.01□□□□□ -0.65
RAB40B-202ENST00000538809 CMC4P56277 68 aaPredicted RBP11.01□□□□□ -0.65
RAB40B-202ENST00000538809 DEFB131AP59861 70 aa11.01□□□□□ -0.65
RAB40B-202ENST00000538809 TRIQKQ629K1 86 aa11.01□□□□□ -0.65
RAB40B-202ENST00000538809 ETFRF1Q6IPR1 90 aa11.01□□□□□ -0.65
RAB40B-202ENST00000538809 ACY3Q96HD9 319 aa11.01□□□□□ -0.65
RAB40B-202ENST00000538809 TMED3Q9Y3Q3 217 aa11.01□□□□□ -0.65
RAB40B-202ENST00000538809 TRAV2A0A0B4J234 112 aa11□□□□□ -0.65
RAB40B-202ENST00000538809 A0A1W2PS18 150 aa11□□□□□ -0.65
RAB40B-202ENST00000538809 FAM90A26D6RGX4 464 aa11□□□□□ -0.65
RAB40B-202ENST00000538809 ATP5IP56385 69 aaPredicted RBP11□□□□□ -0.65
RAB40B-202ENST00000538809 NPIPB3Q92617 1050 aa11□□□□□ -0.65
RAB40B-202ENST00000538809 CSTL1Q9H114 145 aa11□□□□□ -0.65
RAB40B-202ENST00000538809 FLVCR2Q9UPI3 526 aa11□□□□□ -0.65
RAB40B-202ENST00000538809 C9orf170A2RU37 121 aa10.99□□□□□ -0.65
RAB40B-202ENST00000538809 MPTX1A8MV57 137 aa10.99□□□□□ -0.65
RAB40B-202ENST00000538809 IL7P13232 177 aa10.99□□□□□ -0.65
RAB40B-202ENST00000538809 GGNBP1Q5YKI7 109 aa10.99□□□□□ -0.65
RAB40B-202ENST00000538809 NARS2Q96I59 477 aaKnown RBP10.99□□□□□ -0.65
RAB40B-202ENST00000538809 C7orf50Q9BRJ6 194 aaKnown RBP10.99□□□□□ -0.65
RAB40B-202ENST00000538809 IGKV1D-37A0A075B6S9 117 aa10.98□□□□□ -0.65
RAB40B-202ENST00000538809 K7EQG2 157 aa10.98□□□□□ -0.65
RAB40B-202ENST00000538809 TOMM40O96008 361 aa10.98□□□□□ -0.65
RAB40B-202ENST00000538809 CA1P00915 261 aaPredicted RBP10.98□□□□□ -0.65
RAB40B-202ENST00000538809 IL4P05112 153 aa10.98□□□□□ -0.65
RAB40B-202ENST00000538809 HNRNPCP07910 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
RAB40B-202ENST00000538809 HOXB5P09067 269 aa10.98□□□□□ -0.65
RAB40B-202ENST00000538809 ZNF688P0C7X2 276 aa10.98□□□□□ -0.65
RAB40B-202ENST00000538809 INPP1P49441 399 aa10.98□□□□□ -0.65
RAB40B-202ENST00000538809 USF2Q15853 346 aaPredicted RBP10.98□□□□□ -0.65
RAB40B-202ENST00000538809 Q8WTZ3 238 aa10.98□□□□□ -0.65
RAB40B-202ENST00000538809 PRSS46E5RG02 174 aa10.97□□□□□ -0.65
RAB40B-202ENST00000538809 PLA2G10O15496 165 aa10.97□□□□□ -0.65
RAB40B-202ENST00000538809 IAPPP10997 89 aa10.97□□□□□ -0.65
RAB40B-202ENST00000538809 GPX4P36969 197 aaPredicted RBP10.97□□□□□ -0.65
RAB40B-202ENST00000538809 DHRS2Q13268 280 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms