RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CXorf1O96002 111 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 ZNF114Q8NC26 417 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 OR1B1Q8NGR6 318 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 LINC00527Q9UJ94 153 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 NPBQ8NG41 125 aa11.17□□□□□ -0.62
ACTN1-205ENST00000538545 TCRBV4S1A1TA0A5B7 111 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 FNDC10F2Z333 226 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 CTRB1P17538 263 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 CTRB2Q6GPI1 263 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 Q8N9W7 124 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 NECAP1Q8NC96 275 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 HIST1H2BAQ96A08 127 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 SDF2L1Q9HCN8 221 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 MANBALQ9NQG1 85 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 TRBV20OR9-2A0A075B6H5 130 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 OR2C1O95371 312 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 MINOS1Q5TGZ0 78 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 CCDC144NLQ6NUI1 221 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 BCL6BQ8N143 479 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-205ENST00000538545 Q8N6K4 173 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 ZNF355PQ9NSJ1 428 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 MINOS1-NBL1R4GNA1 71 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 ACANP16112 2415 aa11.16□□□□□ -0.62
ACTN1-205ENST00000538545 IGHV3-35A0A0C4DH35 117 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 A0A0U1RQK1 487 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 I3L2K1 104 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 CRYGCP07315 174 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 MAS1LP35410 378 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 PAX8Q06710 450 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 RNF5Q99942 180 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 IGHV3OR16-8A0A075B7F1 116 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 IGHV7-81A0A0B4J1V7 117 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 K7EIM0 57 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 COX7A2P2O60397 106 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 RHEBQ15382 184 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 TIGITQ495A1 244 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 RNF212Q495C1 297 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 OR5AU1Q8NGC0 362 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 ARPC1AQ92747 370 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 MALSU1Q96EH3 234 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 C7orf69Q9H7B7 122 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 DNAJC4Q9NNZ3 241 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 KCNIP2Q9NS61 270 aa11.15□□□□□ -0.62
ACTN1-205ENST00000538545 CUBNO60494 3623 aa11.15□□□□□ -0.63
ACTN1-205ENST00000538545 ATP5IP56385 69 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-205ENST00000538545 LY6EQ16553 131 aa11.14□□□□□ -0.63
ACTN1-205ENST00000538545 ECSCRQ19T08 205 aa11.14□□□□□ -0.63
ACTN1-205ENST00000538545 LINC00305Q7Z4B0 112 aa11.14□□□□□ -0.63
ACTN1-205ENST00000538545 HIF1ANQ9NWT6 349 aa11.14□□□□□ -0.63
ACTN1-205ENST00000538545 G3V318 75 aa11.14□□□□□ -0.63
ACTN1-205ENST00000538545 CXCL1P09341 107 aa11.14□□□□□ -0.63
ACTN1-205ENST00000538545 EGR2P11161 476 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-205ENST00000538545 RPL23P62829 140 aaKnown RBP11.14□□□□□ -0.63
ACTN1-205ENST00000538545 FAM167A-AS1Q96KT0 104 aa11.14□□□□□ -0.63
ACTN1-205ENST00000538545 RBM14Q96PK6 669 aaKnown RBP11.14□□□□□ -0.63
ACTN1-205ENST00000538545 ITPR3Q14573 2671 aa11.14□□□□□ -0.63
ACTN1-205ENST00000538545 TGIF2-C20orf24A0A0A6YYL0 155 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 MDFIC2A0A1B0GVS7 189 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 OR2J3O76001 311 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 PSG1P11464 419 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 C10orf113Q5VZT2 155 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 ZNF562Q6V9R5 426 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 THAP8Q8NA92 274 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 FANCD2OSQ96PS1 177 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 LYZP61626 148 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 TMEM241Q24JQ0 296 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 TMEM116Q8NCL8 245 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 Q8WTZ3 238 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 FAM106CPP0CH98 169 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 PMS2P11Q13670 270 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 BLNKQ8WV28 456 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 ELOVL1Q9BW60 279 aa11.13□□□□□ -0.63
ACTN1-205ENST00000538545 TBL2Q9Y4P3 447 aaKnown RBP11.13□□□□□ -0.63
ACTN1-205ENST00000538545 GGTLC3B5MD39 225 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 TMEM250H0YL14 139 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 ATP6V0E1O15342 81 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 IGKV1-17P01599 117 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 MSMBP08118 114 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 IGLC1P0CG04 106 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 C8orf88P0DMB2 117 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 SUMO1P63165 101 aaKnown RBP11.12□□□□□ -0.63
ACTN1-205ENST00000538545 EBI3Q14213 229 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 PVRIGQ6DKI7 326 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 SGK494Q96LW2 274 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 LINC00479Q96M42 142 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 TMUB1Q9BVT8 246 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 TECRQ9NZ01 308 aaKnown RBP11.12□□□□□ -0.63
ACTN1-205ENST00000538545 FASNP49327 2511 aaKnown RBP11.12□□□□□ -0.63
ACTN1-205ENST00000538545 GCN1Q92616 2671 aaKnown RBP11.12□□□□□ -0.63
ACTN1-205ENST00000538545 IGHV1-69DA0A0B4J2H0 117 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 IGHV1-69P01742 117 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 CRYBB3P26998 211 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 UBE2L3P68036 154 aaKnown RBP11.12□□□□□ -0.63
ACTN1-205ENST00000538545 MLXQ9UH92 298 aa11.12□□□□□ -0.63
ACTN1-205ENST00000538545 FLNAP21333 2647 aaKnown RBP11.11□□□□□ -0.63
ACTN1-205ENST00000538545 NDUFB8O95169 186 aa11.11□□□□□ -0.63
ACTN1-205ENST00000538545 ELOBQ15370 118 aa11.11□□□□□ -0.63
ACTN1-205ENST00000538545 PIFOQ8TCI5 191 aa11.11□□□□□ -0.63
ACTN1-205ENST00000538545 NAT8Q9UHE5 227 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms