RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 SLC25A17O43808 307 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 RAMP3O60896 148 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 PITX3O75364 302 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 OR2C1O95371 312 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 CNIH1O95406 144 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 HPRT1P00492 218 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 OR5AC1P0C628 307 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 NQO2P16083 231 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 F2RP25116 425 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 MAS1LP35410 378 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 AKR1C3P42330 323 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 LINC00205P59089 165 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 RND3P61587 244 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 POLR2GP62487 172 aaKnown RBP eCLIP3.4□□□□□ -1.87
SNHG1-208ENST00000538266 RPL30P62888 115 aaKnown RBP3.4□□□□□ -1.87
SNHG1-208ENST00000538266 EIF4EBP1Q13541 118 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-208ENST00000538266 KIAA0141Q14154 515 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-208ENST00000538266 EBI3Q14213 229 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF266Q14584 549 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 SOHLH1Q5JUK2 328 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM182Q6ZP80 229 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-208ENST00000538266 SSX9Q7RTT3 188 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 LGI3Q8N145 548 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 Q8N6K4 173 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 C5orf56Q8N8D9 126 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 LRTM2Q8N967 370 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 FAM213BQ8TBF2 198 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 GALNT14Q96FL9 552 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 SPIN2AQ99865 258 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 SPIN2BQ9BPZ2 258 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 RCL1Q9Y2P8 373 aaKnown RBP3.4□□□□□ -1.87
SNHG1-208ENST00000538266 TMED3Q9Y3Q3 217 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 CSMD1Q96PZ7 3565 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 ZANQ9Y493 2812 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 NSD1Q96L73 2696 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-208ENST00000538266 A0A1B0GUS0 222 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 GAGE12JA6NER3 117 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 ST8SIA3O43173 380 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 TGOLN2O43493 480 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 S1PR2O95136 353 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 NDUFA7O95182 113 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 CDS2O95674 445 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 KRASP01116 189 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 HLA-DRB1P01911 266 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 HBE1P02100 147 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 SAA1P0DJI8 122 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-208ENST00000538266 VDAC1P21796 283 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 CNTFRP26992 372 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 VDAC2P45880 294 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-208ENST00000538266 OR2B8PP59922 312 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 CD81P60033 236 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 UBE2KP61086 200 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 GNB1P62873 340 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 BLCAPP62952 87 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 EWSR1Q01844 656 aaKnown RBP eCLIP3.39□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM187Q14656 261 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 PSG5Q15238 335 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 TNXAQ16473 311 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 C5orf64Q2M2E5 130 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 SP6Q3SY56 376 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 ASPHD1Q5U4P2 390 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 OR4A47Q6IF82 309 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 DPPA3Q6W0C5 159 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 H2BFWTQ7Z2G1 175 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 SLC35E3Q7Z769 313 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 PPP1R27Q86WC6 154 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 ZNF695Q8IW36 515 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 VKORC1L1Q8N0U8 176 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-208ENST00000538266 Q8N9W7 124 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 TEX45Q8NA69 505 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 NPBQ8NG41 125 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 OR4A5Q8NH83 315 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 ARPC1AQ92747 370 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 ISOC2Q96AB3 205 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 RBMXL1Q96E39 390 aaKnown RBP3.39□□□□□ -1.87
SNHG1-208ENST00000538266 GNPNAT1Q96EK6 184 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-208ENST00000538266 TP53RKQ96S44 253 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 PFDN5Q99471 154 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 C20orf24Q9BUV8 137 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 C19orf24Q9BVV8 132 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 SCRT1Q9BWW7 348 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 SLC25A31Q9H0C2 315 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 TMEM222Q9H0R3 208 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 FBXL15Q9H469 300 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 MAP6D1Q9H9H5 199 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 WFDC1Q9HC57 220 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 SIGLEC9Q9Y336 463 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 FBXO7Q9Y3I1 522 aa3.39□□□□□ -1.87
SNHG1-208ENST00000538266 TEP1Q99973 2627 aaKnown RBP3.39□□□□□ -1.87
SNHG1-208ENST00000538266 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 DUXBA0A1W2PPF3 345 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 CLPSL1A2RUU4 121 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 RBFOX3A6NFN3 312 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 SH2D7A6NKC9 451 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-208ENST00000538266 SRRM4A7MD48 611 aaKnown RBP3.38□□□□□ -1.87
SNHG1-208ENST00000538266 B4DEV8 164 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 SEC14L6B5MCN3 397 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 KBTBD11O94819 623 aa3.38□□□□□ -1.87
SNHG1-208ENST00000538266 NDUFA3O95167 84 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms