RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 TIMP3P35625 211 aa9.25□□□□□ -0.93
LINC00346-201ENST00000538077 BPESC1Q9GZL8 116 aa9.25□□□□□ -0.93
LINC00346-201ENST00000538077 VCX2Q9H322 139 aa9.25□□□□□ -0.93
LINC00346-201ENST00000538077 PLSCR4Q9NRQ2 329 aa9.25□□□□□ -0.93
LINC00346-201ENST00000538077 TRGV1A0A0A0MS02 117 aa9.25□□□□□ -0.93
LINC00346-201ENST00000538077 TMEM183AQ8IXX5 376 aa9.25□□□□□ -0.93
LINC00346-201ENST00000538077 MBNL3Q9NUK0 354 aaKnown RBP9.25□□□□□ -0.93
LINC00346-201ENST00000538077 DUSP14O95147 198 aaKnown RBP9.25□□□□□ -0.93
LINC00346-201ENST00000538077 UCP1P25874 307 aa9.25□□□□□ -0.93
LINC00346-201ENST00000538077 TTC32Q5I0X7 151 aa9.25□□□□□ -0.93
LINC00346-201ENST00000538077 C12orf54Q6X4T0 127 aa9.25□□□□□ -0.93
LINC00346-201ENST00000538077 VSIRQ9H7M9 311 aa9.25□□□□□ -0.93
LINC00346-201ENST00000538077 IGKV1D-8A0A087WSZ0 117 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.24□□□□□ -0.93
LINC00346-201ENST00000538077 CA1P00915 261 aaPredicted RBP9.24□□□□□ -0.93
LINC00346-201ENST00000538077 KLHDC3Q9BQ90 382 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 WDR81Q562E7 1941 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 A0A1B0GV90 55 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 IZUMO1RA6ND01 250 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 LINC00205P59089 165 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 PVRIGQ6DKI7 326 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 LINC00518Q8N0U6 118 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 EXOC3-AS1Q8N2X6 119 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 TRAV3A0A0B4J244 114 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 TRAV21A0A0B4J279 112 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 NPIPB5A8MRT5 1133 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 FABP5P3A8MUU1 101 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 FCN3O75636 299 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 ADMP35318 185 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 IFI27P40305 119 aaPredicted RBP9.24□□□□□ -0.93
LINC00346-201ENST00000538077 CFHR3Q02985 330 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 ZNF474Q6S9Z5 364 aaPredicted RBP9.24□□□□□ -0.93
LINC00346-201ENST00000538077 ZNF600Q6ZNG1 722 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 NXT2Q9NPJ8 142 aaKnown RBP9.24□□□□□ -0.93
LINC00346-201ENST00000538077 MDC1Q14676 2089 aaKnown RBP9.24□□□□□ -0.93
LINC00346-201ENST00000538077 DPRXA6NFQ7 191 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 DDTP30046 118 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 SPATA31B1PQ5VZV4 182 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 LINC01356Q8N9X3 169 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 SSC4DQ8WTU2 575 aa9.24□□□□□ -0.93
LINC00346-201ENST00000538077 TRAV2A0A0B4J234 112 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 B4DSR2 109 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 CTAG1AP78358 180 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 CIARTQ8N365 385 aaPredicted RBP9.23□□□□□ -0.93
LINC00346-201ENST00000538077 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 SCRT1Q9BWW7 348 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 SEPSECSQ9HD40 501 aaKnown RBP9.23□□□□□ -0.93
LINC00346-201ENST00000538077 C5orf63A6NC05 138 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 RPUSD1Q9UJJ7 312 aaKnown RBP9.23□□□□□ -0.93
LINC00346-201ENST00000538077 VENTXO95231 258 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 DUTP33316 252 aaKnown RBP9.23□□□□□ -0.93
LINC00346-201ENST00000538077 C1QL4Q86Z23 238 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 ORMDL3Q8N138 153 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 SLC50A1Q9BRV3 221 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 SLC25A15Q9Y619 301 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 DOCK4Q8N1I0 1966 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 IGKV1-27A0A075B6S5 117 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 LYPD3O95274 346 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 TDGF1P3P51864 188 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 EPDR1Q9UM22 224 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 PSG8Q9UQ74 426 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 TRGV11A0A075B6L2 103 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 ATP5LO75964 103 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 CLPSP04118 112 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 NHLRC3Q5JS37 347 aa9.23□□□□□ -0.93
LINC00346-201ENST00000538077 FAM110DQ8TAY7 271 aaPredicted RBP9.23□□□□□ -0.93
LINC00346-201ENST00000538077 SRSF3P84103 164 aaKnown RBP9.22□□□□□ -0.93
LINC00346-201ENST00000538077 ZNRD1Q9P1U0 126 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 CD8AP01732 235 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 ATP5IP56385 69 aaPredicted RBP9.22□□□□□ -0.93
LINC00346-201ENST00000538077 C20orf204Q6ZNR8 217 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 CACNG8Q8WXS5 425 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 IGKV1-12A0A0C4DH73 117 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 IL18BPO95998 194 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 IGKV1D-12P01611 117 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 CA7P43166 264 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 GAFA1Q96PS6 74 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 ZNF257Q9Y2Q1 563 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 GATA4P43694 442 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 SAMD13Q5VXD3 122 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 SDHCQ99643 169 aaPredicted RBP9.22□□□□□ -0.93
LINC00346-201ENST00000538077 PRADC1Q9BSG0 188 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 SLC25A39Q9BZJ4 359 aaPredicted RBP9.22□□□□□ -0.93
LINC00346-201ENST00000538077 C19orf67A6NJJ6 358 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 TET1Q8NFU7 2136 aa9.22□□□□□ -0.93
LINC00346-201ENST00000538077 PMS2P5A8MQ11 134 aa9.21□□□□□ -0.93
LINC00346-201ENST00000538077 LINC00158P58513 81 aa9.21□□□□□ -0.93
LINC00346-201ENST00000538077 PRCDQ00LT1 54 aa9.21□□□□□ -0.93
LINC00346-201ENST00000538077 WFDC1Q9HC57 220 aa9.21□□□□□ -0.93
LINC00346-201ENST00000538077 F8VVB4 439 aa9.21□□□□□ -0.93
LINC00346-201ENST00000538077 F8VWA3 439 aa9.21□□□□□ -0.93
LINC00346-201ENST00000538077 SRP19P09132 144 aaKnown RBP9.21□□□□□ -0.93
LINC00346-201ENST00000538077 DTX2Q86UW9 622 aa9.21□□□□□ -0.93
LINC00346-201ENST00000538077 DMRT1Q9Y5R6 373 aa9.21□□□□□ -0.93
LINC00346-201ENST00000538077 KNL1Q8NG31 2342 aa9.21□□□□□ -0.93
LINC00346-201ENST00000538077 THSD7BQ9C0I4 1608 aa9.21□□□□□ -0.93
LINC00346-201ENST00000538077 RPRMLQ8N4K4 120 aa9.21□□□□□ -0.93
LINC00346-201ENST00000538077 CHTOPQ9Y3Y2 248 aaKnown RBP9.21□□□□□ -0.93
LINC00346-201ENST00000538077 IGLV3-32A0A0A0MS00 114 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms