RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 FGF6P10767 208 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 SRSF6Q13247 344 aaKnown RBP12.69□□□□□ -0.38
CHFR-213ENST00000536843 TMEM178AQ8NBL3 297 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 VSTM2AQ8TAG5 236 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 SLC25A33Q9BSK2 321 aa12.69□□□□□ -0.38
CHFR-213ENST00000536843 AMMECR1Q9Y4X0 333 aaPredicted RBP12.69□□□□□ -0.38
CHFR-213ENST00000536843 PPIAL4EA0A075B759 164 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 PPIAL4CA0A0B4J2A2 164 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 GOSR1O95249 250 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 PPIAL4FP0DN26 164 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 GPR12P47775 334 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 PLP1P60201 277 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 TBC1D28Q2M2D7 210 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 PLPPR2Q96GM1 343 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 PSMB11A5LHX3 300 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 NKX2-8O15522 239 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 UQCRFS1P47985 274 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 DEFB124Q8NES8 71 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 NDFIP1Q9BT67 221 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 MCRIP2Q9BUT9 160 aaKnown RBP12.68□□□□□ -0.38
CHFR-213ENST00000536843 MRPL32Q9BYC8 188 aaKnown RBP12.68□□□□□ -0.38
CHFR-213ENST00000536843 MED12LQ86YW9 2145 aa12.68□□□□□ -0.38
CHFR-213ENST00000536843 IGHV3-64DA0A0J9YX35 117 aa12.67□□□□□ -0.38
CHFR-213ENST00000536843 DEFB108AA8MXU0 73 aa12.67□□□□□ -0.38
CHFR-213ENST00000536843 ADH4P08319 380 aa12.67□□□□□ -0.38
CHFR-213ENST00000536843 AZU1P20160 251 aa12.67□□□□□ -0.38
CHFR-213ENST00000536843 IGHV1-2P23083 117 aa12.67□□□□□ -0.38
CHFR-213ENST00000536843 KIR3DS1Q14943 382 aa12.67□□□□□ -0.38
CHFR-213ENST00000536843 OR4A5Q8NH83 315 aa12.67□□□□□ -0.38
CHFR-213ENST00000536843 TET2Q6N021 2002 aaPredicted RBP12.67□□□□□ -0.38
CHFR-213ENST00000536843 PEX7O00628 323 aa12.67□□□□□ -0.38
CHFR-213ENST00000536843 CCL11P51671 97 aa12.67□□□□□ -0.38
CHFR-213ENST00000536843 ALKBH6Q3KRA9 238 aa12.67□□□□□ -0.38
CHFR-213ENST00000536843 TPRX1Q8N7U7 411 aa12.67□□□□□ -0.38
CHFR-213ENST00000536843 FAM167A-AS1Q96KT0 104 aa12.67□□□□□ -0.38
CHFR-213ENST00000536843 FOXA2Q9Y261 457 aaPredicted RBP12.67□□□□□ -0.38
CHFR-213ENST00000536843 IGKV1OR2-108A0A075B7D4 117 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 A0A1W2PPM0 123 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 F2RL2O00254 374 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 LYZL6O75951 148 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 HSPE1P61604 102 aaKnown RBP12.66□□□□□ -0.38
CHFR-213ENST00000536843 UBE2L3P68036 154 aaKnown RBP12.66□□□□□ -0.38
CHFR-213ENST00000536843 OR13A1Q8NGR1 328 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 SIGMAR1Q99720 223 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 SPCS1Q9Y6A9 102 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 TMEM189A5PLL7 270 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 HSD52Q0P140 79 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 TEX45Q8NA69 505 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 SLC25A2Q9BXI2 301 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 ENY2Q9NPA8 101 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 TMEM14BQ9NUH8 114 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 RABAC1Q9UI14 185 aa12.66□□□□□ -0.38
CHFR-213ENST00000536843 FRYQ5TBA9 3013 aa12.65□□□□□ -0.38
CHFR-213ENST00000536843 EP300Q09472 2414 aaPredicted RBP12.65□□□□□ -0.38
CHFR-213ENST00000536843 SNAI2O43623 268 aa12.65□□□□□ -0.38
CHFR-213ENST00000536843 FAM87AP0C7U9 286 aa12.65□□□□□ -0.38
CHFR-213ENST00000536843 FTH1P19P0C7X4 201 aa12.65□□□□□ -0.38
CHFR-213ENST00000536843 KIR2DS2P43631 304 aa12.65□□□□□ -0.38
CHFR-213ENST00000536843 ZNF329Q86UD4 541 aa12.65□□□□□ -0.38
CHFR-213ENST00000536843 RFESDQ8TAC1 157 aa12.65□□□□□ -0.38
CHFR-213ENST00000536843 HCFC1P51610 2035 aa12.65□□□□□ -0.38
CHFR-213ENST00000536843 H0Y8G0 127 aa12.64□□□□□ -0.39
CHFR-213ENST00000536843 C15orf65H3BRN8 121 aa12.64□□□□□ -0.39
CHFR-213ENST00000536843 CD24P25063 80 aa12.64□□□□□ -0.39
CHFR-213ENST00000536843 CT83Q5H943 113 aa12.64□□□□□ -0.39
CHFR-213ENST00000536843 PRR7Q8TB68 274 aa12.64□□□□□ -0.39
CHFR-213ENST00000536843 ATP6V0BQ99437 205 aa12.64□□□□□ -0.39
CHFR-213ENST00000536843 SELENOKQ9Y6D0 94 aa12.64□□□□□ -0.39
CHFR-213ENST00000536843 PRRC2CQ9Y520 2896 aaKnown RBP12.64□□□□□ -0.39
CHFR-213ENST00000536843 SPINT2O43291 252 aa12.64□□□□□ -0.39
CHFR-213ENST00000536843 PRR31Q5SQ13 230 aa12.64□□□□□ -0.39
CHFR-213ENST00000536843 WDR82Q6UXN9 313 aa12.64□□□□□ -0.39
CHFR-213ENST00000536843 FDCSPQ8NFU4 85 aa12.64□□□□□ -0.39
CHFR-213ENST00000536843 S1PR3Q99500 378 aa12.64□□□□□ -0.39
CHFR-213ENST00000536843 RPP21Q9H633 154 aaKnown RBP12.64□□□□□ -0.39
CHFR-213ENST00000536843 SPAARA0A1B0GVQ0 90 aa12.63□□□□□ -0.39
CHFR-213ENST00000536843 S100A7AQ86SG5 101 aa12.63□□□□□ -0.39
CHFR-213ENST00000536843 BOD1L2Q8IYS8 172 aa12.63□□□□□ -0.39
CHFR-213ENST00000536843 NAA38Q9BRA0 125 aaKnown RBP12.63□□□□□ -0.39
CHFR-213ENST00000536843 FAM234AQ9H0X4 552 aa12.63□□□□□ -0.39
CHFR-213ENST00000536843 LOC400499M0QZD8 3231 aa12.63□□□□□ -0.39
CHFR-213ENST00000536843 A8MWL6 223 aa12.63□□□□□ -0.39
CHFR-213ENST00000536843 SIVA1O15304 175 aa12.63□□□□□ -0.39
CHFR-213ENST00000536843 OR9G4Q8NGQ1 327 aa12.63□□□□□ -0.39
CHFR-213ENST00000536843 ZNF747Q9BV97 191 aa12.63□□□□□ -0.39
CHFR-213ENST00000536843 PRSS22Q9GZN4 317 aa12.63□□□□□ -0.39
CHFR-213ENST00000536843 GTSF1LQ9H1H1 148 aa12.63□□□□□ -0.39
CHFR-213ENST00000536843 GRPP07492 148 aa12.62□□□□□ -0.39
CHFR-213ENST00000536843 CNEP1R1Q8N9A8 125 aa12.62□□□□□ -0.39
CHFR-213ENST00000536843 GTSF1Q8WW33 167 aa12.62□□□□□ -0.39
CHFR-213ENST00000536843 NEU4Q8WWR8 484 aaPredicted RBP12.62□□□□□ -0.39
CHFR-213ENST00000536843 DDB2Q92466 427 aa12.62□□□□□ -0.39
CHFR-213ENST00000536843 ADTRPQ96IZ2 230 aa12.62□□□□□ -0.39
CHFR-213ENST00000536843 TMUB1Q9BVT8 246 aa12.62□□□□□ -0.39
CHFR-213ENST00000536843 TEX48A0A1B0GUV7 120 aa12.62□□□□□ -0.39
CHFR-213ENST00000536843 WNT9BO14905 357 aa12.62□□□□□ -0.39
CHFR-213ENST00000536843 AGFG2O95081 481 aa12.62□□□□□ -0.39
CHFR-213ENST00000536843 IGHG3P01860 377 aa12.62□□□□□ -0.39
CHFR-213ENST00000536843 WT1P19544 449 aaPredicted RBP12.62□□□□□ -0.39
CHFR-213ENST00000536843 MPV17P39210 176 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms