RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 TNFRSF14Q92956 283 aa12.9□□□□□ -0.35
CHMP1A-202ENST00000535997 RITA1Q96K30 269 aa12.9□□□□□ -0.35
CHMP1A-202ENST00000535997 TMEM133Q9H2Q1 129 aa12.9□□□□□ -0.35
CHMP1A-202ENST00000535997 MRPL36Q9P0J6 103 aaKnown RBP12.9□□□□□ -0.35
CHMP1A-202ENST00000535997 E7EQL1 145 aa12.89□□□□□ -0.35
CHMP1A-202ENST00000535997 IGHV3-48P01763 117 aa12.89□□□□□ -0.35
CHMP1A-202ENST00000535997 GPX1P07203 203 aa12.89□□□□□ -0.35
CHMP1A-202ENST00000535997 CD33P20138 364 aa12.89□□□□□ -0.35
CHMP1A-202ENST00000535997 TCL1AP56279 114 aa12.89□□□□□ -0.35
CHMP1A-202ENST00000535997 SLC35B1P78383 322 aa12.89□□□□□ -0.35
CHMP1A-202ENST00000535997 TPTE2P1Q5T6R2 138 aa12.89□□□□□ -0.35
CHMP1A-202ENST00000535997 RASL11AQ6T310 242 aa12.89□□□□□ -0.35
CHMP1A-202ENST00000535997 SIGLECL1Q8N7X8 197 aa12.89□□□□□ -0.35
CHMP1A-202ENST00000535997 IGLC7A0M8Q6 106 aa12.88□□□□□ -0.35
CHMP1A-202ENST00000535997 F2Z2F3 143 aa12.88□□□□□ -0.35
CHMP1A-202ENST00000535997 PEX7O00628 323 aa12.88□□□□□ -0.35
CHMP1A-202ENST00000535997 ENSAO43768 121 aaKnown RBP12.88□□□□□ -0.35
CHMP1A-202ENST00000535997 TEX43Q6ZNM6 134 aa12.88□□□□□ -0.35
CHMP1A-202ENST00000535997 TNFRSF19Q9NS68 423 aa12.88□□□□□ -0.35
CHMP1A-202ENST00000535997 MYCNOSP40205 109 aa12.88□□□□□ -0.35
CHMP1A-202ENST00000535997 CHRDL1Q9BU40 450 aa12.88□□□□□ -0.35
CHMP1A-202ENST00000535997 TPSG1Q9NRR2 321 aa12.88□□□□□ -0.35
CHMP1A-202ENST00000535997 IGHV1-69-2A0A0G2JMI3 117 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 APOBEC3AP31941 199 aaPredicted RBP12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 MRPL54Q6P161 138 aaKnown RBP12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 TOMM20LQ6UXN7 152 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 NHLRC2Q8NBF2 726 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 TMEM116Q8NCL8 245 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 WIPF2Q8TF74 440 aaPredicted RBP12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 MBD6Q96DN6 1003 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 PERPQ96FX8 193 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 TRGV9Q99603 122 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 ZNF331Q9NQX6 463 aaPredicted RBP12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 PIEZO2Q9H5I5 2752 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 POLEQ07864 2286 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 ZNF253O75346 499 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 REG1AP05451 166 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 PRRX1P54821 245 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 DMRTC2Q8IXT2 367 aaPredicted RBP12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 C22orf15Q8WYQ4 148 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 FAM168AQ92567 244 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 C20orf144Q9BQM9 153 aa12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 RALYQ9UKM9 306 aaKnown RBP12.87□□□□□ -0.35
CHMP1A-202ENST00000535997 C22orf46C9J442 243 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 BMPR1BO00238 502 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 KALRNO60229 2985 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 ORM2P19652 201 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 CASP6P55212 293 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 TMEM183BQ1AE95 376 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 KIAA1644Q3SXP7 199 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 HCP5Q6MZN7 132 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 NUDT10Q8NFP7 164 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 NUDT11Q96G61 164 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 GRAMD2BQ96HH9 432 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 EPDR1Q9UM22 224 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 B9A039 149 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 CA1P00915 261 aaPredicted RBP12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 IGLV1-47P01700 117 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 APCSP02743 223 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 CRYGBP07316 175 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 RPL27AP46776 148 aaKnown RBP12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 TBR1Q16650 682 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 SMIM12Q96EX1 92 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 KLF12Q9Y4X4 402 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 DMXL2Q8TDJ6 3036 aa12.86□□□□□ -0.35
CHMP1A-202ENST00000535997 IGHV3-72A0A0B4J1Y9 119 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 M0R143 59 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 CORTO00230 105 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 RNF224P0DH78 156 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 PAX2Q02962 417 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 CBLN4Q9NTU7 201 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 ZNF586Q9NXT0 402 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 IGHV2-26A0A0B4J1V2 119 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 TRAV34A0A0B4J273 112 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 A0A1W2PS18 150 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 HIST1H1EP10412 219 aaKnown RBP12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 SRIP30626 198 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 CDKN1AP38936 164 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 MFAP2P55001 183 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 OR1B1Q8NGR6 318 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 VN1R17PQ8TDU5 208 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 SSBP3Q9BWW4 388 aaPredicted RBP12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 SNHG12Q9BXW3 62 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 SIGLEC9Q9Y336 463 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 INSIG2Q9Y5U4 225 aa12.85□□□□□ -0.35
CHMP1A-202ENST00000535997 HYPMO75409 117 aa12.84□□□□□ -0.35
CHMP1A-202ENST00000535997 NBEAP1P0C6P0 100 aa12.84□□□□□ -0.35
CHMP1A-202ENST00000535997 COMPP49747 757 aaPredicted RBP12.84□□□□□ -0.35
CHMP1A-202ENST00000535997 TNXAQ16473 311 aa12.84□□□□□ -0.35
CHMP1A-202ENST00000535997 TDRG1Q3Y452 100 aa12.84□□□□□ -0.35
CHMP1A-202ENST00000535997 KCNS1Q96KK3 526 aa12.84□□□□□ -0.35
CHMP1A-202ENST00000535997 PLAUP00749 431 aa12.83□□□□□ -0.35
CHMP1A-202ENST00000535997 RAB4AP20338 218 aa12.83□□□□□ -0.35
CHMP1A-202ENST00000535997 UBE2G1P62253 170 aa12.83□□□□□ -0.35
CHMP1A-202ENST00000535997 RUSC1-AS1Q66K80 236 aa12.83□□□□□ -0.35
CHMP1A-202ENST00000535997 PRSS33Q8NF86 280 aa12.83□□□□□ -0.35
CHMP1A-202ENST00000535997 NUP35Q8NFH5 326 aa12.83□□□□□ -0.35
CHMP1A-202ENST00000535997 NRN1Q9NPD7 142 aa12.83□□□□□ -0.35
CHMP1A-202ENST00000535997 TBL2Q9Y4P3 447 aaKnown RBP12.83□□□□□ -0.35
CHMP1A-202ENST00000535997 APC2O95996 2303 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms