RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 JTBO76095 146 aa12.55□□□□□ -0.4
VAMP1-205ENST00000535927 S100A7P31151 101 aa12.55□□□□□ -0.4
VAMP1-205ENST00000535927 AKR1C1Q04828 323 aa12.55□□□□□ -0.4
VAMP1-205ENST00000535927 KHDC1LQ5JSQ8 128 aa12.55□□□□□ -0.4
VAMP1-205ENST00000535927 DPF1Q92782 380 aa12.55□□□□□ -0.4
VAMP1-205ENST00000535927 CCDC140Q96MF4 163 aa12.55□□□□□ -0.4
VAMP1-205ENST00000535927 WDR83OSQ9Y284 106 aa12.55□□□□□ -0.4
VAMP1-205ENST00000535927 LSM4Q9Y4Z0 139 aaKnown RBP12.55□□□□□ -0.4
VAMP1-205ENST00000535927 NUDT19A8MXV4 375 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 CTSGP08311 255 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 OR10J1P30954 320 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 ARL3P36405 182 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 MYCNOSP40205 109 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 MLANAQ16655 118 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 PXDC1Q5TGL8 231 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 TREML4Q6UXN2 200 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 CLEC19AQ6UXS0 136 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 GPHB5Q86YW7 130 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 KLHL30-AS1Q8NEE0 82 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 OR4F17Q8NGA8 305 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 SCGB1C1Q8TD33 95 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 ACY3Q96HD9 319 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 OR4F4Q96R69 305 aa12.54□□□□□ -0.4
VAMP1-205ENST00000535927 KANTRA0A1W2PQU2 76 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 ZFP92A6NM28 416 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 F8W735 103 aaPredicted RBP12.53□□□□□ -0.4
VAMP1-205ENST00000535927 LINC01619G3V211 115 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 IGHV3-11P01762 117 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 IGLC1P0CG04 106 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 ZNF616Q08AN1 781 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 FAM106AQ4KMX7 169 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 ZNF600Q6ZNG1 722 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 LCNL1Q6ZST4 164 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 S100A7AQ86SG5 101 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 OR1N2Q8NGR9 330 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 Q8WTZ3 238 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 ARPC5LQ9BPX5 153 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 GNB4Q9HAV0 340 aa12.53□□□□□ -0.4
VAMP1-205ENST00000535927 SMCO3A2RU48 225 aa12.52□□□□□ -0.41
VAMP1-205ENST00000535927 C17orf112F2Z3M2 114 aa12.52□□□□□ -0.41
VAMP1-205ENST00000535927 GPR183P32249 361 aa12.52□□□□□ -0.41
VAMP1-205ENST00000535927 KRTAP10-3P60369 221 aa12.52□□□□□ -0.41
VAMP1-205ENST00000535927 TMUB2Q71RG4 321 aa12.52□□□□□ -0.41
VAMP1-205ENST00000535927 ZNF709Q8N972 641 aa12.52□□□□□ -0.41
VAMP1-205ENST00000535927 UBAC2Q8NBM4 344 aa12.52□□□□□ -0.41
VAMP1-205ENST00000535927 FBXL17Q9UF56 701 aa12.52□□□□□ -0.41
VAMP1-205ENST00000535927 PFDN2Q9UHV9 154 aa12.52□□□□□ -0.41
VAMP1-205ENST00000535927 RNF24Q9Y225 148 aa12.52□□□□□ -0.41
VAMP1-205ENST00000535927 IGHV3-21A0A0B4J1V1 117 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 OR2T8A6NH00 312 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 ADARB2-AS1A8MUL3 147 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 CCL24O00175 119 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 LGALS9O00182 355 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 NDUFA4O00483 81 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 TOMM40O96008 361 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 IGKV1-17P01599 117 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 RD3LP0DJH9 198 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 RPL29P47914 159 aaKnown RBP12.51□□□□□ -0.41
VAMP1-205ENST00000535927 EIF2B2P49770 351 aaKnown RBP12.51□□□□□ -0.41
VAMP1-205ENST00000535927 ELLP55199 621 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-205ENST00000535927 FHL3Q13643 280 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 CLINT1Q14677 625 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 RPEL1Q2QD12 228 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 LGALSLQ3ZCW2 172 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-205ENST00000535927 BTNL8Q6UX41 500 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 OR11H1Q8NG94 326 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 GNPNAT1Q96EK6 184 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-205ENST00000535927 WDR61Q9GZS3 305 aaKnown RBP12.51□□□□□ -0.41
VAMP1-205ENST00000535927 ARL6Q9H0F7 186 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 TIMM9Q9Y5J7 89 aa12.51□□□□□ -0.41
VAMP1-205ENST00000535927 BCL2L11O43521 198 aa12.5□□□□□ -0.41
VAMP1-205ENST00000535927 OR2C1O95371 312 aa12.5□□□□□ -0.41
VAMP1-205ENST00000535927 CXCL2P19875 107 aa12.5□□□□□ -0.41
VAMP1-205ENST00000535927 ADMP35318 185 aa12.5□□□□□ -0.41
VAMP1-205ENST00000535927 C11orf44Q8N8P7 122 aa12.5□□□□□ -0.41
VAMP1-205ENST00000535927 BPIFCQ8NFQ6 507 aa12.5□□□□□ -0.41
VAMP1-205ENST00000535927 OR51G1Q8NGK1 321 aa12.5□□□□□ -0.41
VAMP1-205ENST00000535927 MRPL36Q9P0J6 103 aaKnown RBP12.5□□□□□ -0.41
VAMP1-205ENST00000535927 SLC45A2Q9UMX9 530 aa12.5□□□□□ -0.41
VAMP1-205ENST00000535927 IGKV1D-37A0A075B6S9 117 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 ANKRD34BA5PLL1 514 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 K7EMT4 169 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 M0QZ24 198 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 BMPR1BO00238 502 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 IGHV3-48P01763 117 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 HNRNPCP07910 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
VAMP1-205ENST00000535927 CAMLGP49069 296 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 PLP1P60201 277 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 SERF2P84101 59 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 CD300CQ08708 224 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 KLF5Q13887 457 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-205ENST00000535927 CYP2G1PQ6ZSU1 146 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 REC114Q7Z4M0 266 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 GINS3Q9BRX5 216 aa12.49□□□□□ -0.41
VAMP1-205ENST00000535927 PSMG3Q9BT73 122 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-205ENST00000535927 IGKV1OR2-108A0A075B7D4 117 aa12.48□□□□□ -0.41
VAMP1-205ENST00000535927 UBE2L5PA0A1B0GUS4 154 aa12.48□□□□□ -0.41
VAMP1-205ENST00000535927 AGPAT2O15120 278 aa12.48□□□□□ -0.41
VAMP1-205ENST00000535927 IGHV3-23P01764 117 aa12.48□□□□□ -0.41
VAMP1-205ENST00000535927 FGF7P21781 194 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms