RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 ZSWIM8A7E2V4 1837 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 UBR2Q8IWV8 1755 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 TENM1Q9UKZ4 2725 aa1.51□□□□□ -2.17
VBP1-203ENST00000535916 DENND4CQ5VZ89 1909 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 ZNF106Q9H2Y7 1883 aaKnown RBP1.5□□□□□ -2.17
VBP1-203ENST00000535916 ECM29Q5VYK3 1845 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 A0A087X0T9 212 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 MUC21A0A0G2JKD1 596 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 MUC21A0A140T8X8 626 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 C3orf84H3BNL1 204 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 CREBL2O60519 120 aaPredicted RBP1.5□□□□□ -2.17
VBP1-203ENST00000535916 PFDN1O60925 122 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 CSRP1P21291 193 aaKnown RBP1.5□□□□□ -2.17
VBP1-203ENST00000535916 NFYAP23511 347 aaPredicted RBP1.5□□□□□ -2.17
VBP1-203ENST00000535916 CCR2P41597 374 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 POLR2HP52434 150 aaKnown RBP1.5□□□□□ -2.17
VBP1-203ENST00000535916 TCF24Q7RTU0 167 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 SLC35E3Q7Z769 313 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 BPIFA4PQ86YQ2 179 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 PRR15Q8IV56 129 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 OR5J2Q8NH18 312 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 DNAJC9Q8WXX5 260 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 CCDC115Q96NT0 180 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 AIF1LQ9BQI0 150 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 DOHHQ9BU89 302 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 ASB4Q9Y574 426 aa1.5□□□□□ -2.17
VBP1-203ENST00000535916 RIC1Q4ADV7 1423 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 STRCQ7RTU9 1775 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 ADAMTS7Q9UKP4 1686 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 RIMBP3CA6NJZ7 1639 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 RIMBP3BA6NNM3 1639 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 SMARCA4P51532 1647 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 RIMBP3Q9UFD9 1639 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 MYH3P11055 1940 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 A0A087WX48 190 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 TRBV10-2A0A0K0K1G8 114 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 TRDV1A0A1B0GX56 115 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 ARRDC5A6NEK1 342 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 TLCD2A6NGC4 264 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 H7BYZ3 331 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 H7C2G1 150 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 TMEM256-PLSCR3K7ERE1 68 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 SLC22A1O15245 554 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 GGCTO75223 188 aaKnown RBP1.49□□□□□ -2.17
VBP1-203ENST00000535916 IGLV6-57P01721 117 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 RPL7P18124 248 aaKnown RBP1.49□□□□□ -2.17
VBP1-203ENST00000535916 OGNP20774 298 aaKnown RBP1.49□□□□□ -2.17
VBP1-203ENST00000535916 RPS3P23396 243 aaKnown RBP eCLIP1.49□□□□□ -2.171e-6■■■■□ 26
VBP1-203ENST00000535916 FXYD2P54710 66 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 ZNF90Q03938 601 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 PABPC1L2AQ5JQF8 200 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 FKBP1CQ5VVH2 108 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 AGTRAPQ6RW13 159 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 TRAPPC6BQ86SZ2 158 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 ANGPTL5Q86XS5 388 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 TMEM86AQ8N2M4 240 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 OR8D4Q8NGM9 314 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 CANT1Q8WVQ1 401 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 TVP23CQ96ET8 276 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 HIST1H2BLQ99880 126 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 Q9BRP9 147 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 CCDC32Q9BV29 185 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 OSTCQ9NRP0 149 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 JPT1Q9UK76 154 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 EPDR1Q9UM22 224 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 CCL26Q9Y258 94 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 TIMM9Q9Y5J7 89 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 SORL1Q92673 2214 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 PRR14LQ5THK1 2151 aa1.49□□□□□ -2.17
VBP1-203ENST00000535916 PIK3C2AO00443 1686 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 PEG3Q9GZU2 1588 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 IGHV3-64A0A075B6Q5 118 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 IGHV1-18A0A0C4DH31 117 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 A0A1B0GVG6 124 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 FAM107AO95990 144 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 SHBGP04278 402 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 HMGN1P05114 100 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 CTSGP08311 255 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 COX6A1P12074 109 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 GPX2P18283 190 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 NFYBP25208 207 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 FUSP35637 526 aaKnown RBP eCLIP1.48□□□□□ -2.17
VBP1-203ENST00000535916 UBE2BP63146 152 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 SS18Q15532 418 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 BCL2L15Q5TBC7 163 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 C22orf39Q6P5X5 142 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 OR9Q1Q8NGQ5 310 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 TEX37Q96LM6 180 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 HSPB9Q9BQS6 159 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 C6orf62Q9GZU0 229 aaPredicted RBP1.48□□□□□ -2.17
VBP1-203ENST00000535916 TMEM126AQ9H061 195 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 SPANXA1Q9NS26 97 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 MED11Q9P086 117 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 CKLFQ9UBR5 152 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 LAMTOR3Q9UHA4 124 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 MED31Q9Y3C7 131 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 NUBP2Q9Y5Y2 271 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 SCN10AQ9Y5Y9 1956 aa1.48□□□□□ -2.17
VBP1-203ENST00000535916 ARHGEF28Q8N1W1 1705 aaKnown RBP1.48□□□□□ -2.17
VBP1-203ENST00000535916 CEP164Q9UPV0 1460 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms