RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 CLEC19AQ6UXS0 136 aa2.64□□□□□ -1.99
ECHDC1-223ENST00000534442 CYB561D1Q8N8Q1 229 aa2.64□□□□□ -1.99
ECHDC1-223ENST00000534442 OR10G2Q8NGC3 310 aa2.64□□□□□ -1.99
ECHDC1-223ENST00000534442 CIRBP-AS1Q8TBR5 109 aa2.64□□□□□ -1.99
ECHDC1-223ENST00000534442 PTX4Q96A99 478 aa2.64□□□□□ -1.99
ECHDC1-223ENST00000534442 REEP6Q96HR9 211 aa2.64□□□□□ -1.99
ECHDC1-223ENST00000534442 RDH12Q96NR8 316 aa2.64□□□□□ -1.99
ECHDC1-223ENST00000534442 CHST6Q9GZX3 395 aa2.64□□□□□ -1.99
ECHDC1-223ENST00000534442 WFDC1Q9HC57 220 aa2.64□□□□□ -1.99
ECHDC1-223ENST00000534442 HES4Q9HCC6 221 aa2.64□□□□□ -1.99
ECHDC1-223ENST00000534442 LINC00846Q9NV44 126 aa2.64□□□□□ -1.99
ECHDC1-223ENST00000534442 PRORSD1PA6NEY8 169 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 CPSF4LA6NMK7 179 aaKnown RBP2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 ZNF729A6NN14 1252 aaPredicted RBP2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 J3QT63 122 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 YIF1AO95070 293 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 SPART-AS1P0CW21 52 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 DTYMKP23919 212 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 GNG10P50151 68 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 MNAT1P51948 309 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 AESQ08117 197 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 CEACAM21Q3KPI0 293 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 KLHL12Q53G59 568 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 FAM131AQ6UXB0 335 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 SAXO1Q8IYX7 474 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 LINC00471Q8N535 108 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 LFNGQ8NES3 379 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 OR1L1Q8NH94 360 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 RTN4IP1Q8WWV3 396 aaPredicted RBP2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 CACNG8Q8WXS5 425 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 LEAP2Q969E1 77 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 USMG5Q96IX5 58 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 OR52E6Q96RD3 313 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 ZNF251Q9BRH9 671 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 SYT4Q9H2B2 425 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 OR52D1Q9H346 318 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 HMG20AQ9NP66 347 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 CYB5R1Q9UHQ9 305 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 KLK12Q9UKR0 248 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 RAB26Q9ULW5 256 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 ZNF257Q9Y2Q1 563 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 FIS1Q9Y3D6 152 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 DNAJC15Q9Y5T4 150 aa2.63□□□□□ -1.99
ECHDC1-223ENST00000534442 CENPXA8MT69 81 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 C5orf58C9J3I9 102 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 ZNF207O43670 478 aaKnown RBP2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 GLAP06280 429 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 HTN3P15516 51 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 CRABP1P29762 137 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 POLR2IP36954 125 aaKnown RBP2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 TAS2R46P59540 309 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 RPL23P62829 140 aaKnown RBP2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 SLAQ13239 276 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 CIRBPQ14011 172 aaKnown RBP2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 PTGES3Q15185 160 aaKnown RBP2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 ZNF829Q3KNS6 432 aaPredicted RBP2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 MESTQ5EB52 335 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 SPIN3Q5JUX0 258 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 DNM1P34Q6PK57 102 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 OR5A2Q8NGI9 324 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 PFN4Q8NHR9 129 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 COQ8AQ8NI60 647 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 ANP32BQ92688 251 aaKnown RBP2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 TESCQ96BS2 214 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 Q96M85 177 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 CAMK2N2Q96S95 79 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 HSD17B10Q99714 261 aaKnown RBP2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 COPS4Q9BT78 406 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 NMNAT1Q9HAN9 279 aaPredicted RBP2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 TMEM216Q9P0N5 145 aa2.62□□□□□ -1.99
ECHDC1-223ENST00000534442 IGKV1-27A0A075B6S5 117 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 ODAMA1E959 279 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 TMEM213A2RRL7 107 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 OR4C46A6NHA9 309 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 KRBOX1C9JBD0 128 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 MRPS14O60783 128 aaKnown RBP2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 SERPINB7O75635 380 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 REG1AP05451 166 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 IL3RAP26951 378 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 S100A3P33764 101 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 CDKN2CP42773 168 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 HAAOP46952 286 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 CMC4P56277 68 aaPredicted RBP2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 OR2B8PP59922 312 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 KRTAP12-2P59991 146 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 CDC42P60953 191 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 PAFAH1B2P68402 229 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 KRR1Q13601 381 aaKnown RBP2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 SMUG1Q53HV7 270 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 Q5W150 140 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 TIFABQ6ZNK6 161 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 Q6ZVH6 145 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 SSX7Q7RTT5 188 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 FAM58AQ8N1B3 248 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 TWIST2Q8WVJ9 160 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 MAL2Q969L2 176 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 LINC00167Q96N53 147 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 NDFIP1Q9BT67 221 aa2.61□□□□□ -1.99
ECHDC1-223ENST00000534442 FAM103A1Q9BTL3 118 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms