RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 GNB1LQ9BYB4 327 aa3.09□□□□□ -1.91
ATM-223ENST00000533979 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
ATM-223ENST00000533979 LINC00470Q9BZP3 86 aa3.09□□□□□ -1.91
ATM-223ENST00000533979 CST9LQ9H4G1 147 aa3.09□□□□□ -1.91
ATM-223ENST00000533979 NANOGQ9H9S0 305 aa3.09□□□□□ -1.91
ATM-223ENST00000533979 CACYBPQ9HB71 228 aaKnown RBP3.09□□□□□ -1.91
ATM-223ENST00000533979 PLSCR3Q9NRY6 295 aa3.09□□□□□ -1.91
ATM-223ENST00000533979 C14orf105Q9NVL8 296 aa3.09□□□□□ -1.91
ATM-223ENST00000533979 MED11Q9P086 117 aa3.09□□□□□ -1.91
ATM-223ENST00000533979 SNX12Q9UMY4 172 aa3.09□□□□□ -1.91
ATM-223ENST00000533979 NBEAL1Q6ZS30 2694 aa3.09□□□□□ -1.91
ATM-223ENST00000533979 UTP20O75691 2785 aaKnown RBP3.09□□□□□ -1.92
ATM-223ENST00000533979 DENND4CQ5VZ89 1909 aa3.09□□□□□ -1.92
ATM-223ENST00000533979 COL6A6A6NMZ7 2263 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 COL5A1P20908 1838 aaPredicted RBP3.08□□□□□ -1.92
ATM-223ENST00000533979 TSC2P49815 1807 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 A8MWP6 167 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 PIRO00625 290 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 OR7C2O60412 319 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 APCSP02743 223 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 ZNF688P0C7X2 276 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 RPL26P61254 145 aaKnown RBP3.08□□□□□ -1.92
ATM-223ENST00000533979 RPS28P62857 69 aaKnown RBP3.08□□□□□ -1.92
ATM-223ENST00000533979 RUNX1Q01196 453 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 LOXL1Q08397 574 aaPredicted RBP3.08□□□□□ -1.92
ATM-223ENST00000533979 PLCXD2Q0VAA5 305 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 HTR4Q13639 388 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 EBPQ15125 230 aaKnown RBP3.08□□□□□ -1.92
ATM-223ENST00000533979 SCGB2B2Q4G0G5 96 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 NANOGP8Q6NSW7 305 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 NTM-AS1Q6ZSK4 140 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 MARCH3Q86UD3 253 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 CALHM3Q86XJ0 350 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 OR2M3Q8NG83 312 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 OR5H2Q8NGV7 314 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 BORCS7Q96B45 105 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 TP53RKQ96S44 253 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 Q9H521 79 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 LHX9Q9NQ69 397 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 ERG28Q9UKR5 140 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 TRAPPC2LQ9UL33 140 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 RPL26L1Q9UNX3 145 aaKnown RBP3.08□□□□□ -1.92
ATM-223ENST00000533979 HDGFL3Q9Y3E1 203 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 MIA3Q5JRA6 1907 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 AHCTF1Q8WYP5 2266 aa3.08□□□□□ -1.92
ATM-223ENST00000533979 PTPRDP23468 1912 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 GREB1Q4ZG55 1949 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 SDK1Q7Z5N4 2213 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 F8P00451 2351 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 TRAV30A0A087WSZ9 112 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 IGKV1-6A0A0C4DH72 117 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 A0A1B0GX51 115 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 TMEM218A2RU14 115 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 C1orf196B1AJZ1 125 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 D6RAR5 112 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 J3KT08 172 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 CCL25O15444 150 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 LY6G6DO95868 133 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 IGKV1-39P01597 117 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 IGLV1-47P01700 117 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 IGLV3-25P01717 112 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 MAS1P04201 325 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 IGKV1D-39P04432 117 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 OR5G3P0C626 314 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 CXCL8P10145 99 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 CTSEP14091 401 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 NPY1RP25929 384 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 CMPK1P30085 196 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 EMP1P54849 157 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 RPS24P62847 133 aaKnown RBP3.07□□□□□ -1.92
ATM-223ENST00000533979 RHEBQ15382 184 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 TMEM241Q24JQ0 296 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 C6orf52Q5T4I8 152 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 LCN8Q6JVE9 175 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 SNX29P2Q8IUI4 249 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 H1FOOQ8IZA3 346 aaPredicted RBP3.07□□□□□ -1.92
ATM-223ENST00000533979 ORMDL3Q8N138 153 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 C1orf158Q8N1D5 194 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 TMEM256Q8N2U0 113 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 OR5A1Q8NGJ0 315 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 OR51A2Q8NGJ7 313 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 JOSD2Q8TAC2 188 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 ZNF675Q8TD23 568 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 MBD3L1Q8WWY6 194 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 SLC7A6Q92536 515 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 RBPMSQ93062 196 aaKnown RBP3.07□□□□□ -1.92
ATM-223ENST00000533979 HIST1H2BAQ96A08 127 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 PKMYT1Q99640 499 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 SNHG12Q9BXW3 62 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 C20orf27Q9GZN8 174 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 HES4Q9HCC6 221 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 LYRM2Q9NU23 88 aaPredicted RBP3.07□□□□□ -1.92
ATM-223ENST00000533979 MRPL16Q9NX20 251 aaKnown RBP3.07□□□□□ -1.92
ATM-223ENST00000533979 TAC3Q9UHF0 121 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 LINC00527Q9UJ94 153 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 PRNDQ9UKY0 176 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 LRBAP50851 2863 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 COL4A2P08572 1712 aa3.07□□□□□ -1.92
ATM-223ENST00000533979 KIF26AQ9ULI4 1882 aaPredicted RBP3.07□□□□□ -1.92
ATM-223ENST00000533979 ANAPC1Q9H1A4 1944 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms