RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 RRNAD1Q96FB5 475 aaKnown RBP12.95□□□□□ -0.34
UBXN1-216ENST00000533908 XCL2Q9UBD3 114 aa12.95□□□□□ -0.34
UBXN1-216ENST00000533908 HELTA6NFD8 242 aa12.94□□□□□ -0.34
UBXN1-216ENST00000533908 FAM90A26D6RGX4 464 aa12.94□□□□□ -0.34
UBXN1-216ENST00000533908 RTL8CO15255 209 aa12.94□□□□□ -0.34
UBXN1-216ENST00000533908 CDS2O95674 445 aa12.94□□□□□ -0.34
UBXN1-216ENST00000533908 HNRNPCP07910 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
UBXN1-216ENST00000533908 YPEL3P61236 119 aaPredicted RBP12.94□□□□□ -0.34
UBXN1-216ENST00000533908 POM121L12Q8N7R1 296 aa12.94□□□□□ -0.34
UBXN1-216ENST00000533908 Q8WTZ3 238 aa12.94□□□□□ -0.34
UBXN1-216ENST00000533908 GLYATL2Q8WU03 294 aa12.94□□□□□ -0.34
UBXN1-216ENST00000533908 NARS2Q96I59 477 aaKnown RBP12.94□□□□□ -0.34
UBXN1-216ENST00000533908 COPZ2Q9P299 210 aa12.94□□□□□ -0.34
UBXN1-216ENST00000533908 FAM25AB3EWG3 89 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 FAM25CB3EWG5 89 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 FAM25GB3EWG6 89 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 H3BMM0 161 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 AMBPP02760 352 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 CD74P04233 296 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 OR10J1P30954 320 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 HTR2BP41595 481 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 DEFB1P60022 68 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 C2orf83Q53S99 150 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 OR1S2Q8NGQ3 325 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 OR52E5Q8NH55 327 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 ZFAND1Q8TCF1 268 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 GPR146Q96CH1 333 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 RTBDNQ9BSG5 229 aaPredicted RBP12.93□□□□□ -0.34
UBXN1-216ENST00000533908 TMEM222Q9H0R3 208 aa12.93□□□□□ -0.34
UBXN1-216ENST00000533908 HEYLQ9NQ87 328 aaPredicted RBP12.93□□□□□ -0.34
UBXN1-216ENST00000533908 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.93□□□□□ -0.34
UBXN1-216ENST00000533908 DYNC1H1Q14204 4646 aaKnown RBP12.93□□□□□ -0.34
UBXN1-216ENST00000533908 M0R2N4 97 aa12.92□□□□□ -0.34
UBXN1-216ENST00000533908 BUB3O43684 328 aa12.92□□□□□ -0.34
UBXN1-216ENST00000533908 OR5AC1P0C628 307 aa12.92□□□□□ -0.34
UBXN1-216ENST00000533908 RORCP51449 518 aa12.92□□□□□ -0.34
UBXN1-216ENST00000533908 SCGB2B2Q4G0G5 96 aa12.92□□□□□ -0.34
UBXN1-216ENST00000533908 SELENOHQ8IZQ5 122 aaKnown RBP12.92□□□□□ -0.34
UBXN1-216ENST00000533908 CCDC71LQ8N9Z2 235 aa12.92□□□□□ -0.34
UBXN1-216ENST00000533908 TMEM229BQ8NBD8 167 aa12.92□□□□□ -0.34
UBXN1-216ENST00000533908 RNASE11Q8TAA1 199 aaKnown RBP12.92□□□□□ -0.34
UBXN1-216ENST00000533908 NPIPB3Q92617 1050 aa12.92□□□□□ -0.34
UBXN1-216ENST00000533908 VCX3AQ9NNX9 186 aa12.92□□□□□ -0.34
UBXN1-216ENST00000533908 RPS10-NUDT3A0A1W2PQS6 291 aa12.91□□□□□ -0.34
UBXN1-216ENST00000533908 IL4P05112 153 aa12.91□□□□□ -0.34
UBXN1-216ENST00000533908 TBPP20226 339 aa12.91□□□□□ -0.34
UBXN1-216ENST00000533908 EIF2B2P49770 351 aaKnown RBP12.91□□□□□ -0.34
UBXN1-216ENST00000533908 AP2S1P53680 142 aaPredicted RBP12.91□□□□□ -0.34
UBXN1-216ENST00000533908 MEF2DQ14814 521 aa12.91□□□□□ -0.34
UBXN1-216ENST00000533908 GDF5OSQ5U4N7 250 aa12.91□□□□□ -0.34
UBXN1-216ENST00000533908 FAAP20Q6NZ36 180 aa12.91□□□□□ -0.34
UBXN1-216ENST00000533908 GSG1LQ6UXU4 331 aa12.91□□□□□ -0.34
UBXN1-216ENST00000533908 CENPSQ8N2Z9 138 aa12.91□□□□□ -0.34
UBXN1-216ENST00000533908 RNASEH2CQ8TDP1 164 aaKnown RBP12.91□□□□□ -0.34
UBXN1-216ENST00000533908 NAA50Q9GZZ1 169 aaKnown RBP12.91□□□□□ -0.34
UBXN1-216ENST00000533908 EXTL2Q9UBQ6 330 aa12.91□□□□□ -0.34
UBXN1-216ENST00000533908 CACNG5Q9UF02 275 aa12.91□□□□□ -0.34
UBXN1-216ENST00000533908 PKD1P98161 4303 aa12.91□□□□□ -0.34
UBXN1-216ENST00000533908 PKHD1P08F94 4074 aa12.91□□□□□ -0.34
UBXN1-216ENST00000533908 TEX13DA0A0J9YY54 714 aaPredicted RBP12.9□□□□□ -0.34
UBXN1-216ENST00000533908 PRSS29PA6NIE9 313 aa12.9□□□□□ -0.34
UBXN1-216ENST00000533908 SCGB2A1O75556 95 aa12.9□□□□□ -0.34
UBXN1-216ENST00000533908 RAB3DO95716 219 aa12.9□□□□□ -0.34
UBXN1-216ENST00000533908 SLC25A4P12235 298 aa12.9□□□□□ -0.34
UBXN1-216ENST00000533908 FAM219AQ8IW50 185 aa12.9□□□□□ -0.34
UBXN1-216ENST00000533908 NRN1Q9NPD7 142 aa12.9□□□□□ -0.34
UBXN1-216ENST00000533908 DNAH11Q96DT5 4516 aa12.9□□□□□ -0.34
UBXN1-216ENST00000533908 P0DMU3 169 aa12.89□□□□□ -0.35
UBXN1-216ENST00000533908 FAM231AP0DMU4 169 aa12.89□□□□□ -0.35
UBXN1-216ENST00000533908 FAM231CP0DMU5 169 aa12.89□□□□□ -0.35
UBXN1-216ENST00000533908 STEAP1BQ6NZ63 245 aa12.89□□□□□ -0.35
UBXN1-216ENST00000533908 MZT2AQ6P582 158 aa12.89□□□□□ -0.35
UBXN1-216ENST00000533908 ZNF705AQ6ZN79 300 aaPredicted RBP12.89□□□□□ -0.35
UBXN1-216ENST00000533908 SLC24A4Q8NFF2 622 aa12.89□□□□□ -0.35
UBXN1-216ENST00000533908 RBPMSQ93062 196 aaKnown RBP12.89□□□□□ -0.35
UBXN1-216ENST00000533908 NDUFAF3Q9BU61 184 aa12.89□□□□□ -0.35
UBXN1-216ENST00000533908 C1QTNF4Q9BXJ3 329 aa12.89□□□□□ -0.35
UBXN1-216ENST00000533908 MIXL1Q9H2W2 232 aa12.89□□□□□ -0.35
UBXN1-216ENST00000533908 NAA60Q9H7X0 242 aa12.89□□□□□ -0.35
UBXN1-216ENST00000533908 SEPSECSQ9HD40 501 aaKnown RBP12.89□□□□□ -0.35
UBXN1-216ENST00000533908 PLA2G2EQ9NZK7 142 aa12.89□□□□□ -0.35
UBXN1-216ENST00000533908 CEBPZOSA8MTT3 80 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 ZNF705FA8MVS1 300 aaPredicted RBP12.88□□□□□ -0.35
UBXN1-216ENST00000533908 B3GALNT1O75752 331 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 TNFAIP8O95379 198 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 TOMM40O96008 361 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 ZNF705DP0CH99 300 aaPredicted RBP12.88□□□□□ -0.35
UBXN1-216ENST00000533908 ZNF705BP0CI00 300 aaPredicted RBP12.88□□□□□ -0.35
UBXN1-216ENST00000533908 RD3LP0DJH9 198 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 PSG1P11464 419 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 HLA-DRB4P13762 266 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 FXYD7P58549 80 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 TAS2R19P59542 299 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 SNRPD3P62318 126 aaKnown RBP12.88□□□□□ -0.35
UBXN1-216ENST00000533908 CTF1Q16619 201 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 SIGLEC15Q6ZMC9 328 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 OR51G1Q8NGK1 321 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 ACY3Q96HD9 319 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 HLA-DRB4X5D2U9 266 aa12.88□□□□□ -0.35
UBXN1-216ENST00000533908 RYR1P21817 5038 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms