RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SLC25A6P12236 298 aa6.56□□□□□ -1.36
COPB1-210ENST00000533533 RELQ04864 619 aaPredicted RBP6.56□□□□□ -1.36
COPB1-210ENST00000533533 GUCA2BQ16661 112 aa6.56□□□□□ -1.36
COPB1-210ENST00000533533 IAH1Q2TAA2 248 aaPredicted RBP6.56□□□□□ -1.36
COPB1-210ENST00000533533 C2orf83Q53S99 150 aa6.56□□□□□ -1.36
COPB1-210ENST00000533533 LCN12Q6JVE5 192 aa6.56□□□□□ -1.36
COPB1-210ENST00000533533 C12orf45Q8N5I9 185 aaPredicted RBP6.56□□□□□ -1.36
COPB1-210ENST00000533533 ZNF431Q8TF32 576 aaPredicted RBP6.56□□□□□ -1.36
COPB1-210ENST00000533533 MITD1Q8WV92 249 aa6.56□□□□□ -1.36
COPB1-210ENST00000533533 ACY3Q96HD9 319 aa6.56□□□□□ -1.36
COPB1-210ENST00000533533 TXN2Q99757 166 aa6.56□□□□□ -1.36
COPB1-210ENST00000533533 FNDC4Q9H6D8 234 aaPredicted RBP6.56□□□□□ -1.36
COPB1-210ENST00000533533 RETNQ9HD89 108 aa6.56□□□□□ -1.36
COPB1-210ENST00000533533 SIGLEC8Q9NYZ4 499 aa6.56□□□□□ -1.36
COPB1-210ENST00000533533 U3KQ87 197 aa6.56□□□□□ -1.36
COPB1-210ENST00000533533 IGHV3-49A0A0A0MS15 119 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 TMEM213A2RRL7 107 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 IZUMO1RA6ND01 250 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 FAM90A26D6RGX4 464 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 F8W735 103 aaPredicted RBP6.55□□□□□ -1.36
COPB1-210ENST00000533533 H3BP45 60 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 NDUFA4O00483 81 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 SYNGR2O43760 224 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 SSSCA1O60232 199 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 PITX3O75364 302 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 CTSGP08311 255 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 CBLN1P23435 193 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 ADMP35318 185 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 NKX2-1P43699 371 aaPredicted RBP6.55□□□□□ -1.36
COPB1-210ENST00000533533 RND2P52198 227 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 POLR2GP62487 172 aaKnown RBP eCLIP6.55□□□□□ -1.36
COPB1-210ENST00000533533 RAB11AP62491 216 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 RPP30P78346 268 aaKnown RBP6.55□□□□□ -1.36
COPB1-210ENST00000533533 BSXQ3C1V8 233 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 CD300EQ496F6 205 aaPredicted RBP6.55□□□□□ -1.36
COPB1-210ENST00000533533 SPANXN5Q5MJ07 72 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 ETFRF1Q6IPR1 90 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 BTNL8Q6UX41 500 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 LINC00322Q6ZN03 302 aaPredicted RBP6.55□□□□□ -1.36
COPB1-210ENST00000533533 NRARPQ7Z6K4 114 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 RNASEH2CQ8TDP1 164 aaKnown RBP6.55□□□□□ -1.36
COPB1-210ENST00000533533 TMEM190Q8WZ59 177 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 CIB3Q96Q77 187 aaPredicted RBP6.55□□□□□ -1.36
COPB1-210ENST00000533533 ATP6V0BQ99437 205 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 FAM110AQ9BQ89 295 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 ZNF436Q9C0F3 470 aaPredicted RBP6.55□□□□□ -1.36
COPB1-210ENST00000533533 GPN1Q9HCN4 374 aaPredicted RBP6.55□□□□□ -1.36
COPB1-210ENST00000533533 MRPL36Q9P0J6 103 aaKnown RBP6.55□□□□□ -1.36
COPB1-210ENST00000533533 ALMS1Q8TCU4 4167 aa6.55□□□□□ -1.36
COPB1-210ENST00000533533 INMT-MINDY4F8WBC2 141 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 CLN5O75503 358 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 SCAF4O95104 1147 aaKnown RBP6.54□□□□□ -1.36
COPB1-210ENST00000533533 TMEM50AO95807 157 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 SLC25A4P12235 298 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 FCGR2BP31994 310 aaPredicted RBP6.54□□□□□ -1.36
COPB1-210ENST00000533533 DEFB114Q30KQ6 69 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 TIGITQ495A1 244 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 ZNF600Q6ZNG1 722 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 RBPMS2Q6ZRY4 209 aaKnown RBP6.54□□□□□ -1.36
COPB1-210ENST00000533533 SLC16A13Q7RTY0 426 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 ZBTB8BQ8NAP8 495 aaPredicted RBP6.54□□□□□ -1.36
COPB1-210ENST00000533533 OR4X1Q8NH49 305 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 TMEM170AQ8WVE7 144 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 NPIPB3Q92617 1050 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 SLC35E1Q96K37 410 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 OR10C1Q96KK4 312 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 DAZ1Q9NQZ3 744 aaKnown RBP6.54□□□□□ -1.36
COPB1-210ENST00000533533 PSENENQ9NZ42 101 aa6.54□□□□□ -1.36
COPB1-210ENST00000533533 STRAPQ9Y3F4 350 aaKnown RBP6.54□□□□□ -1.36
COPB1-210ENST00000533533 PUS1Q9Y606 427 aaKnown RBP eCLIP6.54□□□□□ -1.36
COPB1-210ENST00000533533 IGHV3OR16-13A0A075B7E8 117 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 TRAV30A0A087WSZ9 112 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 IGHV3-74A0A0B4J1X5 117 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 A8MWP6 167 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 L7N2F9 121 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 IL5P05113 134 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 OR10J1P30954 320 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 ELLP55199 621 aaPredicted RBP6.53□□□□□ -1.36
COPB1-210ENST00000533533 CD81P60033 236 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 VAMP2P63027 116 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 PVRIGQ6DKI7 326 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 PRSS54Q6PEW0 395 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 TOMM20LQ6UXN7 152 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 GSG1LQ6UXU4 331 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 OR4D5Q8NGN0 318 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 OR2K2Q8NGT1 345 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 MARC2Q969Z3 335 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 WDR89Q96FK6 387 aaPredicted RBP6.53□□□□□ -1.36
COPB1-210ENST00000533533 GINS3Q9BRX5 216 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 KRTAP17-1Q9BYP8 105 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 TECRQ9NZ01 308 aaKnown RBP6.53□□□□□ -1.36
COPB1-210ENST00000533533 MRPL27Q9P0M9 148 aaKnown RBP6.53□□□□□ -1.36
COPB1-210ENST00000533533 MLXQ9UH92 298 aa6.53□□□□□ -1.36
COPB1-210ENST00000533533 LSM5Q9Y4Y9 91 aaKnown RBP6.53□□□□□ -1.36
COPB1-210ENST00000533533 IGKV3-7A0A075B6H7 116 aa6.52□□□□□ -1.37
COPB1-210ENST00000533533 TRAV14DV4A0A0A6YYC5 116 aa6.52□□□□□ -1.37
COPB1-210ENST00000533533 IGHV3-66A0A0C4DH42 116 aa6.52□□□□□ -1.37
COPB1-210ENST00000533533 SMCO3A2RU48 225 aa6.52□□□□□ -1.37
COPB1-210ENST00000533533 RBMY1BA6NDE4 496 aaKnown RBP6.52□□□□□ -1.37
COPB1-210ENST00000533533 RBMY1EA6NEQ0 496 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms