RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 CLN5O75503 358 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 UPK1BO75841 260 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 TMEM50AO95807 157 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 H2AFB2P0C5Z0 115 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 IGHV4-30-4P0DP06 118 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 SLC25A4P12235 298 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 SLC25A6P12236 298 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 OR10J1P30954 320 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 FCGR2BP31994 310 aaPredicted RBP8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 RPP30P78346 268 aaKnown RBP8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 TIGITQ495A1 244 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 LAMTOR1Q6IAA8 161 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 ZNF600Q6ZNG1 722 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 TMEM116Q8NCL8 245 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 OR4X1Q8NH49 305 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 ANAPC16Q96DE5 110 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 SLC35E1Q96K37 410 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 CIB3Q96Q77 187 aaPredicted RBP8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 NEURL2Q9BR09 285 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 SEC22CQ9BRL7 303 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 GSKIPQ9P0R6 139 aa8.65□□□□□ -1.02
UBASH3B-208ENST00000533451 IGKV3-7A0A075B6H7 116 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 TRAV30A0A087WSZ9 112 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 TRAV14DV4A0A0A6YYC5 116 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 IGHV3-66A0A0C4DH42 116 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 IGHV7-4-1A0A0J9YVY3 117 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 FAM90A26D6RGX4 464 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 H3BP45 60 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 SSSCA1O60232 199 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 PITX3O75364 302 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 CD7P09564 240 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 BMI1P35226 326 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 NKX2-1P43699 371 aaPredicted RBP8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 RAB11AP62491 216 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 RPL11P62913 178 aaKnown RBP8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 ASAH1Q13510 395 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 IAH1Q2TAA2 248 aaPredicted RBP8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 PRSS54Q6PEW0 395 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 TOMM20LQ6UXN7 152 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 TMEM170AQ8WVE7 144 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 NARS2Q96I59 477 aaKnown RBP8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 RHPN1-AS1Q9BWJ2 59 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 TBC1D24Q9ULP9 559 aa8.64□□□□□ -1.03
UBASH3B-208ENST00000533451 ZFP92A6NM28 416 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 ZNF785A8K8V0 405 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 MPTX1A8MV57 137 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 K7EMT4 169 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 CCSO14618 274 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 C8orf88P0DMB2 117 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 TFPI2P48307 235 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 DEFA1P59665 94 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 DEFA3P59666 94 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 SPANXN5Q5MJ07 72 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 PVRIGQ6DKI7 326 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 OR1S2Q8NGQ3 325 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 NPIPB3Q92617 1050 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 METTL26Q96S19 204 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 WFDC10AQ9H1F0 79 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 SMPXQ9UHP9 88 aa8.63□□□□□ -1.03
UBASH3B-208ENST00000533451 TRAV25A0A0B4J276 109 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 C5orf51A6NDU8 294 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 OR11H12B2RN74 326 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 NPPCP23582 126 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 ATP5IP56385 69 aaPredicted RBP8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 POLR2GP62487 172 aaKnown RBP eCLIP8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 SBSPONQ8IVN8 264 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 Q8N1Y9 231 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 LILRB2Q8N423 598 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 GBGT1Q8N5D6 347 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 DEFB125Q8N687 156 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 ZNF431Q8TF32 576 aaPredicted RBP8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 Q8WTZ3 238 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 MITD1Q8WV92 249 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 RNF2Q99496 336 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 SPAG8Q99932 426 aaPredicted RBP8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 SRD5A3Q9H8P0 318 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 UBQLN2Q9UHD9 624 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 STRAPQ9Y3F4 350 aaKnown RBP8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 U3KQK5 164 aa8.62□□□□□ -1.03
UBASH3B-208ENST00000533451 SMCO3A2RU48 225 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 OR4C46A6NHA9 309 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 CHEK1O14757 476 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 IGKV1-17P01599 117 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 IL4P05112 153 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 IGLC1P0CG04 106 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 NHLRC4P0CG21 123 aaPredicted RBP8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 AKR1C1Q04828 323 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 OR8G2PQ6IF36 304 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 TCF24Q7RTU0 167 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 WFDC3Q8IUB2 231 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 C12orf45Q8N5I9 185 aaPredicted RBP8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 ZBTB8BQ8NAP8 495 aaPredicted RBP8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 ST8SIA2Q92186 375 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 GRAMD2BQ96HH9 432 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 OR10C1Q96KK4 312 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 PBDC1Q9BVG4 233 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 TMEM231Q9H6L2 316 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 ZMAT4Q9H898 229 aa8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 GPN1Q9HCN4 374 aaPredicted RBP8.61□□□□□ -1.03
UBASH3B-208ENST00000533451 PSENENQ9NZ42 101 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms