RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TMEM160Q9NX00 188 aa8.89□□□□□ -0.99
COLCA1-203ENST00000532918 GHRHP01286 108 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 CD24P25063 80 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 PRCDQ00LT1 54 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 TRAV21A0A0B4J279 112 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 MCRIP2Q9BUT9 160 aaKnown RBP8.88□□□□□ -0.99
COLCA1-203ENST00000532918 FNDC4Q9H6D8 234 aaPredicted RBP8.88□□□□□ -0.99
COLCA1-203ENST00000532918 CACNA1EQ15878 2313 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 TRBV7-1A0A0A6YYK4 115 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 IGHV1-3A0A0C4DH29 117 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 LYPD3O95274 346 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 GAS1P54826 345 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 FGFBP3Q8TAT2 258 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 NABP1Q96AH0 204 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 ZNF525Q8N782 197 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 OR5AN1Q8NGI8 311 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 OR2K2Q8NGT1 345 aa8.88□□□□□ -0.99
COLCA1-203ENST00000532918 PEX7O00628 323 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 B3GALT5-AS1P59052 145 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 BRD3OSQ6XYD6 125 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 FAM223BA6NKX1 122 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 ERVK11-1P61568 191 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 NHLRC3Q5JS37 347 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 FAM223AQ8IWN6 122 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 PRDM13Q9H4Q3 707 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 ARID1AO14497 2285 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 CHD5Q8TDI0 1954 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 SNAI2O43623 268 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 DUTP33316 252 aaKnown RBP8.87□□□□□ -0.99
COLCA1-203ENST00000532918 PRR30Q53SZ7 412 aaPredicted RBP8.87□□□□□ -0.99
COLCA1-203ENST00000532918 ZNF562Q6V9R5 426 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 SIGLEC15Q6ZMC9 328 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 KLHL30-AS1Q8NEE0 82 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 RSPO3Q9BXY4 272 aaPredicted RBP8.87□□□□□ -0.99
COLCA1-203ENST00000532918 E7EQL1 145 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 LINC00614P0C842 121 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 HBBP68871 147 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 MRPL52Q86TS9 123 aaKnown RBP8.87□□□□□ -0.99
COLCA1-203ENST00000532918 NR2C2APQ86WQ0 139 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 PIP4P2Q8N4L2 257 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 ZNF48Q96MX3 618 aaPredicted RBP8.87□□□□□ -0.99
COLCA1-203ENST00000532918 KLK15Q9H2R5 256 aa8.87□□□□□ -0.99
COLCA1-203ENST00000532918 PDCD11Q14690 1871 aaKnown RBP8.87□□□□□ -0.99
COLCA1-203ENST00000532918 TMEM250H0YL14 139 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 CLPSP04118 112 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 CD7P09564 240 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 TDGF1P13385 188 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 FOXG1P55316 489 aaPredicted RBP8.86□□□□□ -0.99
COLCA1-203ENST00000532918 TMEM219Q86XT9 240 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 MGST2Q99735 147 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 Q9H3A6 140 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 FABP5P3A8MUU1 101 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 A8MWV9 139 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 MALP21145 153 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 PRB3Q04118 309 aaPredicted RBP8.86□□□□□ -0.99
COLCA1-203ENST00000532918 TMEM170BQ5T4T1 132 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 FAM71F2Q6NXP2 309 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 ST6GALNAC6Q969X2 333 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 ZNF415Q09FC8 603 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 CENPWQ5EE01 88 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 IGHV3OR16-8A0A075B7F1 116 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 DANCRP0C864 163 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 HOXA5P20719 270 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 PRTN3P24158 256 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 COL8A2P25067 703 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 SDHCQ99643 169 aaPredicted RBP8.86□□□□□ -0.99
COLCA1-203ENST00000532918 PRADC1Q9BSG0 188 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 KLRD1Q13241 179 aa8.86□□□□□ -0.99
COLCA1-203ENST00000532918 SLC25A48Q6ZT89 311 aaKnown RBP8.86□□□□□ -0.99
COLCA1-203ENST00000532918 C1QL1O75973 258 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 VENTXO95231 258 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 CEACAM8P31997 349 aaPredicted RBP8.85□□□□□ -0.99
COLCA1-203ENST00000532918 MBNL3Q9NUK0 354 aaKnown RBP8.85□□□□□ -0.99
COLCA1-203ENST00000532918 EP300Q09472 2414 aaPredicted RBP8.85□□□□□ -0.99
COLCA1-203ENST00000532918 IFITM2Q01629 132 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 TCF15Q12870 199 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 C5orf64Q2M2E5 130 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 GAFA1Q96PS6 74 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 BUB1B-PAK6H3BSN5 160 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 C15orf32Q32M92 178 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 TMEM42Q69YG0 159 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 LCNL1Q6ZST4 164 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 FAM89BQ8N5H3 189 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 IGKV1-9A0A0C4DH69 117 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 TRBV7-9A0A0J9YWB2 115 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 OR9G4Q8NGQ1 327 aa8.85□□□□□ -0.99
COLCA1-203ENST00000532918 FAM186AA6NE01 2351 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 RBMY1BA6NDE4 496 aaKnown RBP8.84□□□□□ -0.99
COLCA1-203ENST00000532918 RBMY1EA6NEQ0 496 aaKnown RBP8.84□□□□□ -0.99
COLCA1-203ENST00000532918 ATP5LO75964 103 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 RBMY1DP0C7P1 496 aaKnown RBP8.84□□□□□ -0.99
COLCA1-203ENST00000532918 RBMY1A1P0DJD3 496 aaKnown RBP8.84□□□□□ -0.99
COLCA1-203ENST00000532918 RBMY1CP0DJD4 496 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 PAQR4Q8N4S7 273 aaPredicted RBP8.84□□□□□ -0.99
COLCA1-203ENST00000532918 FER1L6-AS1Q8NA97 138 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 SPXQ9BT56 116 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 UBE2E1P51965 193 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 IGF2-ASQ6U949 168 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 LINC00527Q9UJ94 153 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 WISP1O95388 367 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms