RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 SCAF4O95104 1147 aaKnown RBP16.53■□□□□ 0.24
PTPRK-222ENST00000532751 OR10J1P30954 320 aa16.53■□□□□ 0.24
PTPRK-222ENST00000532751 GPX4P36969 197 aaPredicted RBP16.53■□□□□ 0.24
PTPRK-222ENST00000532751 DEFA1P59665 94 aa16.53■□□□□ 0.24
PTPRK-222ENST00000532751 DEFA3P59666 94 aa16.53■□□□□ 0.24
PTPRK-222ENST00000532751 IFITM3Q01628 133 aa16.53■□□□□ 0.24
PTPRK-222ENST00000532751 TIGITQ495A1 244 aa16.53■□□□□ 0.24
PTPRK-222ENST00000532751 C12orf45Q8N5I9 185 aaPredicted RBP16.53■□□□□ 0.24
PTPRK-222ENST00000532751 OR4D5Q8NGN0 318 aa16.53■□□□□ 0.24
PTPRK-222ENST00000532751 ACY3Q96HD9 319 aa16.53■□□□□ 0.24
PTPRK-222ENST00000532751 SLC35E1Q96K37 410 aa16.53■□□□□ 0.24
PTPRK-222ENST00000532751 NEURL2Q9BR09 285 aa16.53■□□□□ 0.24
PTPRK-222ENST00000532751 IGLC1P0CG04 106 aa16.52■□□□□ 0.24
PTPRK-222ENST00000532751 IGHV4-30-4P0DP06 118 aa16.52■□□□□ 0.24
PTPRK-222ENST00000532751 NPIPB3Q92617 1050 aa16.52■□□□□ 0.24
PTPRK-222ENST00000532751 RHPN1-AS1Q9BWJ2 59 aa16.52■□□□□ 0.24
PTPRK-222ENST00000532751 ZFAND3Q9H8U3 227 aa16.52■□□□□ 0.24
PTPRK-222ENST00000532751 A8MZ25 164 aa16.51■□□□□ 0.23
PTPRK-222ENST00000532751 SCGB1D2O95969 90 aa16.51■□□□□ 0.23
PTPRK-222ENST00000532751 IGKV1-17P01599 117 aa16.51■□□□□ 0.23
PTPRK-222ENST00000532751 FRMD6-AS1P0C7T7 363 aa16.51■□□□□ 0.23
PTPRK-222ENST00000532751 NHLRC4P0CG21 123 aaPredicted RBP16.51■□□□□ 0.23
PTPRK-222ENST00000532751 YPEL3P61236 119 aaPredicted RBP16.51■□□□□ 0.23
PTPRK-222ENST00000532751 POLR2GP62487 172 aaKnown RBP eCLIP16.51■□□□□ 0.23
PTPRK-222ENST00000532751 SPANXN5Q5MJ07 72 aa16.51■□□□□ 0.23
PTPRK-222ENST00000532751 ZBTB8BQ8NAP8 495 aaPredicted RBP16.51■□□□□ 0.23
PTPRK-222ENST00000532751 Q8WTZ3 238 aa16.51■□□□□ 0.23
PTPRK-222ENST00000532751 GSKIPQ9P0R6 139 aa16.51■□□□□ 0.23
PTPRK-222ENST00000532751 STRAPQ9Y3F4 350 aaKnown RBP16.51■□□□□ 0.23
PTPRK-222ENST00000532751 CHEK1O14757 476 aa16.5■□□□□ 0.23
PTPRK-222ENST00000532751 IL5P05113 134 aa16.5■□□□□ 0.23
PTPRK-222ENST00000532751 SPAG8Q99932 426 aaPredicted RBP16.5■□□□□ 0.23
PTPRK-222ENST00000532751 TUBA4BQ9H853 241 aa16.5■□□□□ 0.23
PTPRK-222ENST00000532751 GPN1Q9HCN4 374 aaPredicted RBP16.5■□□□□ 0.23
PTPRK-222ENST00000532751 IGHV3-49A0A0A0MS15 119 aa16.49■□□□□ 0.23
PTPRK-222ENST00000532751 FAM25EA8MYX2 175 aa16.49■□□□□ 0.23
PTPRK-222ENST00000532751 TSPAN4O14817 238 aa16.49■□□□□ 0.23
PTPRK-222ENST00000532751 SSSCA1O60232 199 aa16.49■□□□□ 0.23
PTPRK-222ENST00000532751 CD7P09564 240 aa16.49■□□□□ 0.23
PTPRK-222ENST00000532751 NPPCP23582 126 aa16.49■□□□□ 0.23
PTPRK-222ENST00000532751 NRARPQ7Z6K4 114 aa16.49■□□□□ 0.23
PTPRK-222ENST00000532751 METTL26Q96S19 204 aa16.49■□□□□ 0.23
PTPRK-222ENST00000532751 ASCL2Q99929 193 aa16.49■□□□□ 0.23
PTPRK-222ENST00000532751 TMEM231Q9H6L2 316 aa16.49■□□□□ 0.23
PTPRK-222ENST00000532751 PSENENQ9NZ42 101 aa16.49■□□□□ 0.23
PTPRK-222ENST00000532751 A0A1W2PS18 150 aa16.48■□□□□ 0.23
PTPRK-222ENST00000532751 C5orf51A6NDU8 294 aa16.48■□□□□ 0.23
PTPRK-222ENST00000532751 CCSO14618 274 aa16.48■□□□□ 0.23
PTPRK-222ENST00000532751 CD5P06127 495 aa16.48■□□□□ 0.23
PTPRK-222ENST00000532751 GAMTQ14353 236 aa16.48■□□□□ 0.23
PTPRK-222ENST00000532751 NARS2Q96I59 477 aaKnown RBP16.48■□□□□ 0.23
PTPRK-222ENST00000532751 RNF2Q99496 336 aa16.48■□□□□ 0.23
PTPRK-222ENST00000532751 C19orf73Q9NVV2 129 aa16.48■□□□□ 0.23
PTPRK-222ENST00000532751 DNAH9Q9NYC9 4486 aa16.47■□□□□ 0.23
PTPRK-222ENST00000532751 IGHV3OR16-13A0A075B7E8 117 aa16.47■□□□□ 0.23
PTPRK-222ENST00000532751 IGHV3-74A0A0B4J1X5 117 aa16.47■□□□□ 0.23
PTPRK-222ENST00000532751 H3BP45 60 aa16.47■□□□□ 0.23
PTPRK-222ENST00000532751 SMIM8Q96KF7 97 aa16.47■□□□□ 0.23
PTPRK-222ENST00000532751 RAB40CQ96S21 281 aa16.47■□□□□ 0.23
PTPRK-222ENST00000532751 ZFP92A6NM28 416 aa16.46■□□□□ 0.23
PTPRK-222ENST00000532751 OR11H12B2RN74 326 aa16.46■□□□□ 0.23
PTPRK-222ENST00000532751 INMT-MINDY4F8WBC2 141 aa16.46■□□□□ 0.23
PTPRK-222ENST00000532751 PRAF2O60831 178 aa16.46■□□□□ 0.23
PTPRK-222ENST00000532751 TOMM40O96008 361 aa16.46■□□□□ 0.23
PTPRK-222ENST00000532751 ST8SIA2Q92186 375 aa16.46■□□□□ 0.23
PTPRK-222ENST00000532751 VSIRQ9H7M9 311 aa16.46■□□□□ 0.23
PTPRK-222ENST00000532751 OR4C46A6NHA9 309 aa16.45■□□□□ 0.22
PTPRK-222ENST00000532751 FABP1P07148 127 aa16.45■□□□□ 0.22
PTPRK-222ENST00000532751 RD3LP0DJH9 198 aa16.45■□□□□ 0.22
PTPRK-222ENST00000532751 GSG1LQ6UXU4 331 aa16.45■□□□□ 0.22
PTPRK-222ENST00000532751 SBSPONQ8IVN8 264 aa16.45■□□□□ 0.22
PTPRK-222ENST00000532751 C2orf50Q96LR7 162 aa16.45■□□□□ 0.22
PTPRK-222ENST00000532751 APOHP02749 345 aaPredicted RBP16.44■□□□□ 0.22
PTPRK-222ENST00000532751 IL4P05112 153 aa16.44■□□□□ 0.22
PTPRK-222ENST00000532751 CRYBB3P26998 211 aa16.44■□□□□ 0.22
PTPRK-222ENST00000532751 TAS2R30P59541 319 aa16.44■□□□□ 0.22
PTPRK-222ENST00000532751 PAFAH1B2P68402 229 aa16.44■□□□□ 0.22
PTPRK-222ENST00000532751 TCF24Q7RTU0 167 aa16.44■□□□□ 0.22
PTPRK-222ENST00000532751 DEFB125Q8N687 156 aa16.44■□□□□ 0.22
PTPRK-222ENST00000532751 GRAMD2BQ96HH9 432 aa16.44■□□□□ 0.22
PTPRK-222ENST00000532751 IGHV3-66A0A0C4DH42 116 aa16.43■□□□□ 0.22
PTPRK-222ENST00000532751 SNRPGP15A8MWD9 76 aa16.43■□□□□ 0.22
PTPRK-222ENST00000532751 PRSS46E5RG02 174 aa16.43■□□□□ 0.22
PTPRK-222ENST00000532751 L7N2F9 121 aa16.43■□□□□ 0.22
PTPRK-222ENST00000532751 TSC22D2O75157 780 aa16.43■□□□□ 0.22
PTPRK-222ENST00000532751 MBPP02686 304 aaPredicted RBP16.43■□□□□ 0.22
PTPRK-222ENST00000532751 HNRNPCP07910 306 aaKnown RBP eCLIP16.43■□□□□ 0.222e-7■■□□□ 11.7
PTPRK-222ENST00000532751 PSG1P11464 419 aa16.43■□□□□ 0.22
PTPRK-222ENST00000532751 VAMP2P63027 116 aa16.43■□□□□ 0.22
PTPRK-222ENST00000532751 OR51G1Q8NGK1 321 aa16.43■□□□□ 0.22
PTPRK-222ENST00000532751 SRD5A3Q9H8P0 318 aa16.43■□□□□ 0.22
PTPRK-222ENST00000532751 RCL1Q9Y2P8 373 aaKnown RBP16.43■□□□□ 0.22
PTPRK-222ENST00000532751 PAX9P55771 341 aa16.42■□□□□ 0.22
PTPRK-222ENST00000532751 FAM90A2PQ658T7 463 aa16.42■□□□□ 0.22
PTPRK-222ENST00000532751 TRGV9Q99603 122 aa16.42■□□□□ 0.22
PTPRK-222ENST00000532751 MARVELD1Q9BSK0 173 aa16.42■□□□□ 0.22
PTPRK-222ENST00000532751 WFDC10AQ9H1F0 79 aa16.42■□□□□ 0.22
PTPRK-222ENST00000532751 ZMAT4Q9H898 229 aa16.42■□□□□ 0.22
PTPRK-222ENST00000532751 LSM5Q9Y4Y9 91 aaKnown RBP16.42■□□□□ 0.22
PTPRK-222ENST00000532751 IGKV3-7A0A075B6H7 116 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms