RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SIGLEC15Q6ZMC9 328 aa6.47□□□□□ -1.37
CTNND1-230ENST00000532245 C10orf105Q8TEF2 133 aa6.47□□□□□ -1.37
CTNND1-230ENST00000532245 PGLYRP4Q96LB8 373 aa6.47□□□□□ -1.37
CTNND1-230ENST00000532245 NAT1P18440 290 aa6.46□□□□□ -1.37
CTNND1-230ENST00000532245 C2orf68Q2NKX9 166 aa6.46□□□□□ -1.37
CTNND1-230ENST00000532245 FAM74A3Q4VXF1 159 aa6.46□□□□□ -1.37
CTNND1-230ENST00000532245 AWAT1Q58HT5 328 aa6.46□□□□□ -1.37
CTNND1-230ENST00000532245 MUC21Q5SSG8 566 aa6.46□□□□□ -1.37
CTNND1-230ENST00000532245 FAM120AOSQ5T036 256 aa6.46□□□□□ -1.37
CTNND1-230ENST00000532245 PRDM13Q9H4Q3 707 aa6.46□□□□□ -1.37
CTNND1-230ENST00000532245 PEF1Q9UBV8 284 aaKnown RBP6.46□□□□□ -1.37
CTNND1-230ENST00000532245 TGOLN2O43493 480 aa6.46□□□□□ -1.38
CTNND1-230ENST00000532245 RNF166Q96A37 237 aaPredicted RBP6.46□□□□□ -1.38
CTNND1-230ENST00000532245 USMG5Q96IX5 58 aa6.46□□□□□ -1.38
CTNND1-230ENST00000532245 TP53BP1Q12888 1972 aaPredicted RBP6.46□□□□□ -1.38
CTNND1-230ENST00000532245 M0R381 172 aa6.46□□□□□ -1.38
CTNND1-230ENST00000532245 QRFPP83859 136 aa6.46□□□□□ -1.38
CTNND1-230ENST00000532245 ZNF841Q6ZN19 808 aa6.46□□□□□ -1.38
CTNND1-230ENST00000532245 OVOL3O00110 214 aa6.46□□□□□ -1.38
CTNND1-230ENST00000532245 ISLRO14498 428 aa6.46□□□□□ -1.38
CTNND1-230ENST00000532245 ASCL4Q6XD76 172 aa6.46□□□□□ -1.38
CTNND1-230ENST00000532245 IGFBPL1Q8WX77 278 aa6.46□□□□□ -1.38
CTNND1-230ENST00000532245 CTSZQ9UBR2 303 aa6.46□□□□□ -1.38
CTNND1-230ENST00000532245 TRBV6-6A0A0A6YYG2 114 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 TRBV7-1A0A0A6YYK4 115 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 MMP23AO75900 390 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 AREGP15514 252 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 C17orf58Q2M2W7 97 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 SAPCD1Q5SSQ6 148 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 GPR82Q96P67 336 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 SEC11CQ9BY50 192 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 PCDH15Q96QU1 1955 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 TMEM131Q92545 1883 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 A0A0B4J293 547 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 MUC21A0A0G2JKD1 596 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 MUC21A0A140T8X8 626 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 ZNF688P0C7X2 276 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 IGHV4-38-2P0DP08 117 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 OR1N2Q8NGR9 330 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 Q9H3A6 140 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 NPIPB6E9PJ23 425 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 LMO1P25800 156 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 HERPUD1Q15011 391 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 SAMD13Q5VXD3 122 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 ISOC2Q96AB3 205 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 TCEAL7Q9BRU2 100 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 FAM223BA6NKX1 122 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 FAM223AQ8IWN6 122 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 RARRES2Q99969 163 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 MALRD1Q5VYJ5 2156 aa6.45□□□□□ -1.38
CTNND1-230ENST00000532245 FAM90A9PA6NNJ1 464 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 ZNF253O75346 499 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 HOXB4P17483 251 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-230ENST00000532245 ASIPP42127 132 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 DIAPH2-AS1Q14236 149 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 SPSB3Q6PJ21 355 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 SGMS2Q8NHU3 365 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 TSTD3H0UI37 97 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-230ENST00000532245 DUSP14O95147 198 aaKnown RBP6.44□□□□□ -1.38
CTNND1-230ENST00000532245 PYYP10082 97 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 PSG1P11464 419 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 FXYD7P58549 80 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 ACTL10Q5JWF8 245 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 ZNF705AQ6ZN79 300 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-230ENST00000532245 Q6ZN92 141 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 KLHDC1Q8N7A1 406 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 GPR61Q9BZJ8 451 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 F11RQ9Y624 299 aaKnown RBP6.44□□□□□ -1.38
CTNND1-230ENST00000532245 LINC01619G3V211 115 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 APCSP02743 223 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 CD7P09564 240 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 PLA2G2AP14555 144 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 CKS2P33552 79 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 FAM71F2Q6NXP2 309 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 TXNDC17Q9BRA2 123 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 SLC50A1Q9BRV3 221 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 PSMG3Q9BT73 122 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-230ENST00000532245 PIEZO2Q9H5I5 2752 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 CSPG4Q6UVK1 2322 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 A0A1B0GWJ7 208 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 TMEM218A2RU14 115 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 OR11H12B2RN74 326 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 RPS20P60866 119 aaKnown RBP6.44□□□□□ -1.38
CTNND1-230ENST00000532245 FBXL19-AS1Q494R0 122 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 RNF212Q495C1 297 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 ZNF562Q6V9R5 426 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 OR11H1Q8NG94 326 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 RCC1LQ96I51 464 aaKnown RBP6.44□□□□□ -1.38
CTNND1-230ENST00000532245 NEU1Q99519 415 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 YTHDF2Q9Y5A9 579 aaKnown RBP6.44□□□□□ -1.38
CTNND1-230ENST00000532245 HIVEP2P31629 2446 aa6.44□□□□□ -1.38
CTNND1-230ENST00000532245 ZNF343Q6P1L6 599 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 KAAG1Q9UBP8 84 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 GRIFINA4D1Z8 144 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 IGKV1-5P01602 117 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 G0S2P27469 103 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 GNG5P63218 68 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 RELBQ01201 579 aa6.43□□□□□ -1.38
CTNND1-230ENST00000532245 TMEM18Q96B42 140 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms