RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 MCUBQ9NWR8 336 aa4.45□□□□□ -1.7
HMGB1P42-201ENST00000532126 COPZ2Q9P299 210 aa4.45□□□□□ -1.7
HMGB1P42-201ENST00000532126 V9GYH0 126 aa4.45□□□□□ -1.7
HMGB1P42-201ENST00000532126 NBEAL1Q6ZS30 2694 aa4.45□□□□□ -1.7
HMGB1P42-201ENST00000532126 TRAV3A0A0B4J244 114 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 C3orf85A0A1B0GTC6 90 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 FAM223BA6NKX1 122 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 E7EUB6 86 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 LINC01619G3V211 115 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 H0Y980 276 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR2J3O76001 311 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 ATG12O94817 140 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 DHFRP00374 187 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 PRH1P02810 166 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 HSPB1P04792 205 aaKnown RBP4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 CTSDP07339 412 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 DEFA4P12838 97 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 MYOD1P15172 320 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 PSMB6P28072 239 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 FAUP35544 74 aaKnown RBP4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 FHITP49789 147 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 AP3S2P59780 193 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR2B8PP59922 312 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 RHOGP84095 191 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 DEFA5Q01523 94 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 EWSR1Q01844 656 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 ATP5G2Q06055 141 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 SURF2Q15527 256 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 TRIM16LQ309B1 348 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 FAM223AQ8IWN6 122 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 SLC7A5P1Q8MH63 180 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 Q8N402 240 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 TOMM5Q8N4H5 51 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 NECAP1Q8NC96 275 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR51S1Q8NGJ8 323 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR9G4Q8NGQ1 327 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR6Q1Q8NGQ2 317 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 LINC00476Q8WZB0 136 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 MRGPRFQ96AM1 343 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 TP53RKQ96S44 253 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 TSC22D3Q99576 134 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 QTRT1Q9BXR0 403 aaKnown RBP4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 SCP2D1Q9UJQ7 156 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 PRNDQ9UKY0 176 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 PAIP2BQ9ULR5 123 aaKnown RBP4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 C14orf166Q9Y224 244 aaKnown RBP4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 ZNF257Q9Y2Q1 563 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR51B2Q9Y5P1 312 aa4.44□□□□□ -1.7
HMGB1P42-201ENST00000532126 IGHV4OR15-8A0A075B7B6 117 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 A0A087WW49 117 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 TRBV9A0A0B4J1U6 114 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 TEX50A0A1B0GTY4 177 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 A0A1B0GW64 132 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 SEC14L6B5MCN3 397 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 OVOL1O14753 267 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 CYB5BO43169 146 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 RBMXL2O75526 392 aaKnown RBP4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 PRB2P02812 416 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 REG1AP05451 166 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 TRAPPC2P0DI81 140 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 TRAPPC2BP0DI82 140 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 HIST1H1BP16401 226 aaKnown RBP4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 ZP3P21754 424 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 HOXD3P31249 432 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 ETV6P41212 452 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 P2RY1P47900 373 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 INPP1P49441 399 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 ZNF45Q02386 682 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 KLF9Q13886 244 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 ZNF79Q15937 498 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 C15orf32Q32M92 178 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 SP6Q3SY56 376 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 THOC7Q6I9Y2 204 aaKnown RBP4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 ZNF343Q6P1L6 599 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 HSD17B13Q7Z5P4 300 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR1L8Q8NGR8 309 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR5B3Q8NH48 314 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 DCUN1D4Q92564 292 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 DLX4Q92988 240 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 LSM10Q969L4 123 aaKnown RBP4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 SCGB3A2Q96PL1 93 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 RTBDNQ9BSG5 229 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 HINT2Q9BX68 163 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 NAA60Q9H7X0 242 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 FKBP11Q9NYL4 201 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 RNF24Q9Y225 148 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 PRELID1Q9Y255 219 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 DMRT1Q9Y5R6 373 aa4.43□□□□□ -1.7
HMGB1P42-201ENST00000532126 WNK1Q9H4A3 2382 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 PKD1L1Q8TDX9 2849 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 IGLC7A0M8Q6 106 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 CRYM-AS1A6NIL9 109 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 C15orf61A6NNL5 157 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 NDUFB8O95169 186 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 IGKV1-39P01597 117 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 IGKV1D-39P04432 117 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR5AC1P0C628 307 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 OR13C7P0DN81 318 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 CTRB1P17538 263 aa4.42□□□□□ -1.7
HMGB1P42-201ENST00000532126 AKR1C2P52895 323 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms