RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	CNIH2	Q6PI25	160 aa		4.09	□□□□□ -1.75
PUM1-222	ENST00000531867	MRPL55	Q7Z7F7	128 aa	Known RBP	4.09	□□□□□ -1.75
PUM1-222	ENST00000531867	HSD17B11	Q8NBQ5	300 aa		4.09	□□□□□ -1.75
PUM1-222	ENST00000531867	ZNF439	Q8NDP4	499 aa		4.09	□□□□□ -1.75
PUM1-222	ENST00000531867	MRGPRD	Q8TDS7	321 aa		4.09	□□□□□ -1.75
PUM1-222	ENST00000531867	TSSK6	Q9BXA6	273 aa		4.09	□□□□□ -1.75
PUM1-222	ENST00000531867	MRO	Q9BYG7	248 aa		4.09	□□□□□ -1.75
PUM1-222	ENST00000531867	CHST5	Q9GZS9	411 aa		4.09	□□□□□ -1.75
PUM1-222	ENST00000531867	PARL	Q9H300	379 aa		4.09	□□□□□ -1.75
PUM1-222	ENST00000531867	PLGRKT	Q9HBL7	147 aa		4.09	□□□□□ -1.75
PUM1-222	ENST00000531867	GID8	Q9NWU2	228 aa		4.09	□□□□□ -1.75
PUM1-222	ENST00000531867	ERGIC3	Q9Y282	383 aa		4.09	□□□□□ -1.75
PUM1-222	ENST00000531867	IGKV1D-8	A0A087WSZ0	117 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	MEIKIN	A0A087WXM9	373 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	IGKV1-9	A0A0C4DH69	117 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	RIIAD1	A6NNX1	92 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	C15orf65	H3BRN8	121 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867		H3BUA1	57 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	MAGEB4	O15481	346 aa	Predicted RBP	4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	TGOLN2	O43493	480 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	GATB	O75879	557 aa	Known RBP	4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	CYB5A	P00167	134 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	APOB	P04114	4563 aa	Known RBP	4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	ISG15	P05161	165 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	F2R	P25116	425 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	IL3RA	P26951	378 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	SSTR5	P35346	364 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	CBX5	P45973	191 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	NUDT2	P50583	147 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	AP2S1	P53680	142 aa	Predicted RBP	4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	NDUFV3	P56181	108 aa	Known RBP	4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	TPPP2	P59282	170 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	SELENOT	P62341	195 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	LRRC36	Q1X8D7	754 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	ZNF343	Q6P1L6	599 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	ARPIN	Q7Z6K5	226 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	CROCCP2	Q86T23	111 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	CBR4	Q8N4T8	237 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	ZNF645	Q8N7E2	425 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	CCDC54	Q8NEL0	328 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	C11orf45	Q8TAV5	145 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	TLCD1	Q96CP7	247 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	BORCS8	Q96FH0	119 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	YIPF3	Q9GZM5	350 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	ARL6	Q9H0F7	186 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	SCRT2	Q9NQ03	307 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	SLC2A9	Q9NRM0	540 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	TAS2R1	Q9NYW7	299 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867		R4GMQ9	66 aa		4.08	□□□□□ -1.76
PUM1-222	ENST00000531867	IGHV3OR16-13	A0A075B7E8	117 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867		A0A0G2JLM5	398 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	KIR2DL5B	A0A0G2JN68	375 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	KIR2DL5B	A0A0G2JPC4	375 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	DEGS1	O15121	323 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	SLC31A2	O15432	143 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	TRGV3	P03979	118 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	IFNA4	P05014	189 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	CDK1	P06493	297 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	C8orf88	P0DMB2	117 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	GZMH	P20718	246 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	PFN2	P35080	140 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	RBP2	P50120	134 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	OR10A3	P58181	314 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	MLLT11	Q13015	90 aa	Predicted RBP	4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	ATP6AP1	Q15904	470 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	LTC4S	Q16873	150 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867		Q6ZR54	194 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	FAM19A1	Q7Z5A9	133 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	SAXO1	Q8IYX7	474 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	KIR2DL5A	Q8N109	375 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	KIR2DL5B	Q8NHK3	375 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	TEX47	Q8TBZ9	253 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	ZFAND1	Q8TCF1	268 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	ASB17	Q8WXJ9	295 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	PACRG	Q96M98	296 aa	Predicted RBP	4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	ARMC1	Q9NVT9	282 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	OR52A1	Q9UKL2	312 aa		4.07	□□□□□ -1.76
PUM1-222	ENST00000531867	TRAV39	A0A0B4J263	110 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	TNFRSF11B	O00300	401 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	SDCBP	O00560	298 aa	Predicted RBP	4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	ORC5	O43913	435 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	TRBV12-3	P01733	135 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	OR4E1	P0C645	316 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	APOC4	P55056	127 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	NUTF2	P61970	127 aa	Known RBP	4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	RBMY1F	Q15415	496 aa	Known RBP	4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	GUK1	Q16774	197 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	DEFB135	Q30KP9	77 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	TMEM30B	Q3MIR4	351 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	BCL2L15	Q5TBC7	163 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	ELP2	Q6IA86	826 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	OR2T5	Q6IEZ7	315 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	UNQ5815/PRO19632	Q6UWF5	114 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867		Q6ZRP5	223 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	TMUB2	Q71RG4	321 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	SLC16A13	Q7RTY0	426 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	ZFP82	Q8N141	532 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	POM121L12	Q8N7R1	296 aa		4.06	□□□□□ -1.76
PUM1-222	ENST00000531867	OR51S1	Q8NGJ8	323 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms