RNA–Protein interactions for RNA: ENST00000531695.1

CHD7-210, Transcript of chromodomain helicase DNA binding protein 7, human

TSL 2

Gene CHD7, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD7-210	ENST00000531695	WT1-AS	Q06250	92 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	FAM27E3	Q08E93	113 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	OR5I1	Q13606	314 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	TMEM183B	Q1AE95	376 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	CT83	Q5H943	113 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	ETFRF1	Q6IPR1	90 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	VHLL	Q6RSH7	139 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	TOMM20L	Q6UXN7	152 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	PATE2	Q6UY27	113 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	ASCL5	Q7RTU5	278 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	ZNF329	Q86UD4	541 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	DOLPP1	Q86YN1	238 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	TEX45	Q8NA69	505 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	DEFB108B	Q8NET1	73 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	OR5AU1	Q8NGC0	362 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	OR10W1	Q8NGF6	305 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	OR10X1	Q8NGY0	326 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	FLYWCH2	Q96CP2	140 aa	Known RBP	4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	FAM122A	Q96E09	287 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	GRAMD2B	Q96HH9	432 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	KCNS1	Q96KK3	526 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	WFIKKN1	Q96NZ8	548 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	TBX15	Q96SF7	602 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	HSPB9	Q9BQS6	159 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	HINT2	Q9BX68	163 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	GNB4	Q9HAV0	340 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	ZNF492	Q9P255	531 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	FBXL7	Q9UJT9	491 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	WASHC3	Q9Y3C0	194 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	KLF12	Q9Y4X4	402 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	PPIAL4A	Q9Y536	164 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	NAV3	Q8IVL0	2385 aa		4.64	□□□□□ -1.67
CHD7-210	ENST00000531695	BDP1	A6H8Y1	2624 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	VCAN	P13611	3396 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	ARFGEF3	Q5TH69	2177 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695		A0A1W2PPI3	338 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	IGLC7	A0M8Q6	106 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	C22orf46	C9J442	243 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695		E7EUB6	86 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	C16orf97	H3BN30	126 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	NDUFB3	O43676	98 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	COX7A2P2	O60397	106 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	RBP4	P02753	201 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	PLA2G1B	P04054	148 aa	Known RBP	4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	FRMD6-AS1	P0C7T7	363 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	ZNF705D	P0CH99	300 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	ZNF705B	P0CI00	300 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	CCL3L1	P16619	93 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	HNF1A	P20823	631 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	GATA2	P23769	480 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	COL8A2	P25067	703 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	CHRNB4	P30926	498 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	CA7	P43166	264 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	SUMO1	P63165	101 aa	Known RBP	4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	VMA21	Q3ZAQ7	101 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	IBA57	Q5T440	356 aa	Known RBP	4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	MORN5	Q5VZ52	161 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	C10orf113	Q5VZT2	155 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	CYB5R2	Q6BCY4	276 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	C19orf35	Q6ZS72	473 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	ATP5L2	Q7Z4Y8	100 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	NIT1	Q86X76	327 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	C11orf42	Q8N5U0	333 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	OR4B1	Q8NGF8	309 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	SNRNP40	Q96DI7	357 aa	Known RBP	4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	PERP	Q96FX8	193 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	RBM14	Q96PK6	669 aa	Known RBP	4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	SRSF8	Q9BRL6	282 aa	Known RBP	4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	MIEN1	Q9BRT3	115 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	PAXX	Q9BUH6	204 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	MLST8	Q9BVC4	326 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	RNASE7	Q9H1E1	156 aa	Known RBP	4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	ZNF355P	Q9NSJ1	428 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	ZNF586	Q9NXT0	402 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	C1RL	Q9NZP8	487 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	ZNRD1	Q9P1U0	126 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	CTSZ	Q9UBR2	303 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	NAT8B	Q9UHF3	227 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	ZNF835	Q9Y2P0	537 aa		4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	SOX21	Q9Y651	276 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD7-210	ENST00000531695	TRAV5	A0A0B4J249	113 aa		4.62	□□□□□ -1.67
CHD7-210	ENST00000531695		A0A0G2JNJ9	132 aa		4.62	□□□□□ -1.67
CHD7-210	ENST00000531695		A0A1W2PS18	150 aa		4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	C19orf71	A6NCJ1	209 aa		4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	TCAP	O15273	167 aa		4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	ZNF253	O75346	499 aa		4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	ZNF324	O75467	553 aa	Predicted RBP	4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	CDKN1A	P38936	164 aa		4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	PRRX1	P54821	245 aa		4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	SSBP2	P81877	361 aa	Predicted RBP	4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	GAGE1	Q13065	139 aa		4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	USF2	Q15853	346 aa	Predicted RBP	4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	TBR1	Q16650	682 aa		4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	LRRC10	Q5BKY1	277 aa		4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	C16orf54	Q6UWD8	224 aa		4.62	□□□□□ -1.67
CHD7-210	ENST00000531695	BAGE3	Q86Y29	109 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms