RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 HIST3H2BBQ8N257 126 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 C10orf126Q8N4M7 172 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 OR52R1Q8NGF1 315 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 EFCAB11Q9BUY7 163 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 CXCL16Q9H2A7 254 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 OR52A1Q9UKL2 312 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 LTBP2Q14767 1821 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 SCAF11Q99590 1463 aaKnown RBP2.11□□□□□ -2.07
USP47-211ENST00000531513 PTPRSQ13332 1948 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 ZCCHC11Q5TAX3 1644 aaKnown RBP2.1□□□□□ -2.07
USP47-211ENST00000531513 UHRF1BP1Q6BDS2 1440 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 A0A0D9SEW6 157 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 A0A1B0GVG6 124 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 BANF1O75531 89 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 IGKV1-16P04430 117 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 PSMD8P48556 350 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 FXYD2P54710 66 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 ZNF181Q2M3W8 571 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 DEFB115Q30KQ5 88 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 CROCCP2Q86T23 111 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 DHFR2Q86XF0 187 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 ANGPTL5Q86XS5 388 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 TCEAL4Q96EI5 215 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 SCN9AQ15858 1988 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 DOCK6Q96HP0 2047 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 CPDO75976 1380 aa2.1□□□□□ -2.07
USP47-211ENST00000531513 COL4A2P08572 1712 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 DOCK3Q8IZD9 2030 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 BORCS7-ASMTA0A0B4J1R7 106 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 TRGV4A0A0C4DH28 118 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 ARRDC5A6NEK1 342 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 EFCAB10A6NFE3 127 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 OR51F1A6NGY5 319 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 HMSDA8MTL9 139 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 C1orf196B1AJZ1 125 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 LY6LH3BQJ8 138 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 CYB5BO43169 146 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 OGNP20774 298 aaKnown RBP2.09□□□□□ -2.07
USP47-211ENST00000531513 SRP9P49458 86 aaKnown RBP2.09□□□□□ -2.07
USP47-211ENST00000531513 RPS28P62857 69 aaKnown RBP2.09□□□□□ -2.07
USP47-211ENST00000531513 HES1Q14469 280 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 Q6ZTI0 123 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 TMEM86AQ8N2M4 240 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 EXOC3-AS1Q8N2X6 119 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 SIGLECL1Q8N7X8 197 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 TMEM106AQ96A25 262 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 ISOC1Q96CN7 298 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 RMND5BQ96G75 393 aaPredicted RBP2.09□□□□□ -2.07
USP47-211ENST00000531513 GINS4Q9BRT9 223 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 DOHHQ9BU89 302 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 RTL8AQ9BWD3 113 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 OR2J1Q9GZK6 312 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 TMEM133Q9H2Q1 129 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 OSTCQ9NRP0 149 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 MED11Q9P086 117 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 LAMTOR2Q9Y2Q5 125 aa2.09□□□□□ -2.07
USP47-211ENST00000531513 ARHGEF10O15013 1369 aa2.09□□□□□ -2.08
USP47-211ENST00000531513 SCN10AQ9Y5Y9 1956 aa2.09□□□□□ -2.08
USP47-211ENST00000531513 PLXNB1O43157 2135 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 A0A087X0T9 212 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 IGKV1-9A0A0C4DH69 117 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 A0A0G2JQZ4 141 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 ZNF860A6NHJ4 632 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 J3QQQ9 107 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 ARPC5O15511 151 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 CLPSP04118 112 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 CSN2P05814 226 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 PEBP1P30086 187 aaKnown RBP2.08□□□□□ -2.08
USP47-211ENST00000531513 RPL26P61254 145 aaKnown RBP2.08□□□□□ -2.08
USP47-211ENST00000531513 NDUFA5Q16718 116 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 RRN3P1Q2M238 152 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 TMEM138Q9NPI0 162 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 CKLFQ9UBR5 152 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 RPL26L1Q9UNX3 145 aaKnown RBP2.08□□□□□ -2.08
USP47-211ENST00000531513 ARHGAP32A7KAX9 2087 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 RIC1Q4ADV7 1423 aa2.08□□□□□ -2.08
USP47-211ENST00000531513 MED1Q15648 1581 aaPredicted RBP2.07□□□□□ -2.08
USP47-211ENST00000531513 MEIS3P1A6NDR6 274 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 GGCTO75223 188 aaKnown RBP2.07□□□□□ -2.08
USP47-211ENST00000531513 PGLYRP1O75594 196 aaPredicted RBP2.07□□□□□ -2.08
USP47-211ENST00000531513 DBIP07108 87 aaKnown RBP2.07□□□□□ -2.08
USP47-211ENST00000531513 TRGC1P0CF51 173 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 TPRXLQ17RH7 258 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 CCDC153Q494R4 210 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 CCDC58Q4VC31 144 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 KHDC3LQ587J8 217 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 OR5A1Q8NGJ0 315 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 OR8D4Q8NGM9 314 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 WFDC5Q8TCV5 224 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 THEM6Q8WUY1 208 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 SLAMF6Q96DU3 332 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 ADAT3Q96EY9 351 aaPredicted RBP2.07□□□□□ -2.08
USP47-211ENST00000531513 YPEL2Q96QA6 119 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 FAM107BQ9H098 131 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 RASL12Q9NYN1 266 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 GSKIPQ9P0R6 139 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 JPT1Q9UK76 154 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 PAIP2BQ9ULR5 123 aaKnown RBP2.07□□□□□ -2.08
USP47-211ENST00000531513 ASB4Q9Y574 426 aa2.07□□□□□ -2.08
USP47-211ENST00000531513 NUBP2Q9Y5Y2 271 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms