RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 IL34Q6ZMJ4 242 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 REC114Q7Z4M0 266 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 TMEM116Q8NCL8 245 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 OR4X1Q8NH49 305 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 GPR61Q9BZJ8 451 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 ARL6Q9H0F7 186 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 C11orf1Q9H5F2 150 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 SIGLEC8Q9NYZ4 499 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 PSENENQ9NZ42 101 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 MRPL36Q9P0J6 103 aaKnown RBP11.05□□□□□ -0.64
CPSF1-206ENST00000531480 STRAPQ9Y3F4 350 aaKnown RBP11.05□□□□□ -0.64
CPSF1-206ENST00000531480 DNAH3Q8TD57 4116 aa11.05□□□□□ -0.64
CPSF1-206ENST00000531480 TRAV14DV4A0A0A6YYC5 116 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 IGHV3-21A0A0B4J1V1 117 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 RPS10-NUDT3A0A1W2PQS6 291 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 OR2T8A6NH00 312 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 A8MWP6 167 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 DFFBO76075 338 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 IAPPP10997 89 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 OPRK1P41145 380 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 INSL3P51460 131 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 CD69Q07108 199 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 CD300CQ08708 224 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 EGFEM1PQ0D2K5 195 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 ZNF266Q14584 549 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 MLANAQ16655 118 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 OXLD1Q5BKU9 147 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 KCNRGQ8N5I3 272 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 OR9G4Q8NGQ1 327 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 PINX1Q96BK5 328 aaKnown RBP11.04□□□□□ -0.64
CPSF1-206ENST00000531480 OR4C12Q96R67 309 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 ARPC5LQ9BPX5 153 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 CHRDL1Q9BU40 450 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 RNF126Q9BV68 326 aa11.04□□□□□ -0.64
CPSF1-206ENST00000531480 LYRM2Q9NU23 88 aaPredicted RBP11.04□□□□□ -0.64
CPSF1-206ENST00000531480 G3V4G9 280 aa11.03□□□□□ -0.64
CPSF1-206ENST00000531480 CLN5O75503 358 aa11.03□□□□□ -0.64
CPSF1-206ENST00000531480 JTBO76095 146 aa11.03□□□□□ -0.64
CPSF1-206ENST00000531480 OR2C1O95371 312 aa11.03□□□□□ -0.64
CPSF1-206ENST00000531480 GPX4P36969 197 aaPredicted RBP11.03□□□□□ -0.64
CPSF1-206ENST00000531480 NPBWR1P48145 328 aa11.03□□□□□ -0.64
CPSF1-206ENST00000531480 SYNJ2BPP57105 145 aa11.03□□□□□ -0.64
CPSF1-206ENST00000531480 ATP6V1FQ16864 119 aa11.03□□□□□ -0.64
CPSF1-206ENST00000531480 BEAN1Q3B7T3 259 aa11.03□□□□□ -0.64
CPSF1-206ENST00000531480 ETFRF1Q6IPR1 90 aa11.03□□□□□ -0.64
CPSF1-206ENST00000531480 TMUB2Q71RG4 321 aa11.03□□□□□ -0.64
CPSF1-206ENST00000531480 SLC51BQ86UW2 128 aa11.03□□□□□ -0.64
CPSF1-206ENST00000531480 CACNG8Q8WXS5 425 aa11.03□□□□□ -0.64
CPSF1-206ENST00000531480 PMS2P5A8MQ11 134 aa11.02□□□□□ -0.65
CPSF1-206ENST00000531480 NDUFA4O00483 81 aa11.02□□□□□ -0.65
CPSF1-206ENST00000531480 IGHV3-48P01763 117 aa11.02□□□□□ -0.65
CPSF1-206ENST00000531480 SULT1A1P50225 295 aa11.02□□□□□ -0.65
CPSF1-206ENST00000531480 Q56UQ5 140 aa11.02□□□□□ -0.65
CPSF1-206ENST00000531480 C9orf66Q5T8R8 295 aa11.02□□□□□ -0.65
CPSF1-206ENST00000531480 TMEM14EPQ6UXP3 125 aa11.02□□□□□ -0.65
CPSF1-206ENST00000531480 C9orf62Q8N4C0 152 aa11.02□□□□□ -0.65
CPSF1-206ENST00000531480 OR11H4Q8NGC9 324 aa11.02□□□□□ -0.65
CPSF1-206ENST00000531480 OR10P1Q8NGE3 313 aa11.02□□□□□ -0.65
CPSF1-206ENST00000531480 OR1S2Q8NGQ3 325 aa11.02□□□□□ -0.65
CPSF1-206ENST00000531480 OR5AC2Q9NZP5 309 aa11.02□□□□□ -0.65
CPSF1-206ENST00000531480 SEC14L6B5MCN3 397 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 GNG7O60262 68 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 IFNA7P01567 189 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 IFNA5P01569 189 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 IGKV1-17P01599 117 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 CSN3P07498 182 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 ELLP55199 621 aaPredicted RBP11.01□□□□□ -0.65
CPSF1-206ENST00000531480 OPCMLQ14982 345 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 LGALSLQ3ZCW2 172 aaPredicted RBP11.01□□□□□ -0.65
CPSF1-206ENST00000531480 FAM106AQ4KMX7 169 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 Q5BKY6 102 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 SPANXN5Q5MJ07 72 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 UNQ9165/PRO28630Q6UXU0 137 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 ADAMTSL5Q6ZMM2 481 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 SLC16A13Q7RTY0 426 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 TMEM190Q8WZ59 177 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 GGACTQ9BVM4 153 aa11.01□□□□□ -0.65
CPSF1-206ENST00000531480 TRAV30A0A087WSZ9 112 aa11□□□□□ -0.65
CPSF1-206ENST00000531480 NUPL2O15504 423 aaKnown RBP11□□□□□ -0.65
CPSF1-206ENST00000531480 BCL2L11O43521 198 aa11□□□□□ -0.65
CPSF1-206ENST00000531480 IFNA4P05014 189 aa11□□□□□ -0.65
CPSF1-206ENST00000531480 IGLC1P0CG04 106 aa11□□□□□ -0.65
CPSF1-206ENST00000531480 C8orf88P0DMB2 117 aa11□□□□□ -0.65
CPSF1-206ENST00000531480 TPT1P13693 172 aaKnown RBP11□□□□□ -0.65
CPSF1-206ENST00000531480 NKX2-5P52952 324 aaPredicted RBP11□□□□□ -0.65
CPSF1-206ENST00000531480 RELQ04864 619 aaPredicted RBP11□□□□□ -0.65
CPSF1-206ENST00000531480 TMEM252Q8N6L7 170 aa11□□□□□ -0.65
CPSF1-206ENST00000531480 UBAC2Q8NBM4 344 aa11□□□□□ -0.65
CPSF1-206ENST00000531480 ELOVL1Q9BW60 279 aa11□□□□□ -0.65
CPSF1-206ENST00000531480 PEMTQ9UBM1 199 aa11□□□□□ -0.65
CPSF1-206ENST00000531480 TMEM213A2RRL7 107 aa10.99□□□□□ -0.65
CPSF1-206ENST00000531480 C2orf70A6NJV1 201 aa10.99□□□□□ -0.65
CPSF1-206ENST00000531480 G3V3Q6 166 aa10.99□□□□□ -0.65
CPSF1-206ENST00000531480 H0YIZ8 118 aa10.99□□□□□ -0.65
CPSF1-206ENST00000531480 H3BP45 60 aa10.99□□□□□ -0.65
CPSF1-206ENST00000531480 K7EMT4 169 aa10.99□□□□□ -0.65
CPSF1-206ENST00000531480 IGLV1-51P01701 117 aa10.99□□□□□ -0.65
CPSF1-206ENST00000531480 RND2P52198 227 aa10.99□□□□□ -0.65
CPSF1-206ENST00000531480 RAB31Q13636 194 aa10.99□□□□□ -0.65
CPSF1-206ENST00000531480 GAMTQ14353 236 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms