RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 CCL28Q9NRJ3 127 aa6.94□□□□□ -1.3
CHMP4A-205ENST00000531158 SIGLEC8Q9NYZ4 499 aa6.94□□□□□ -1.3
CHMP4A-205ENST00000531158 PLA2G2EQ9NZK7 142 aa6.94□□□□□ -1.3
CHMP4A-205ENST00000531158 RNF150Q9ULK6 438 aa6.94□□□□□ -1.3
CHMP4A-205ENST00000531158 VPS13DQ5THJ4 4388 aa6.94□□□□□ -1.3
CHMP4A-205ENST00000531158 ZNF785A8K8V0 405 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 FAM90A26D6RGX4 464 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 WRBO00258 174 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 SSSCA1O60232 199 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 SERPINE2P07093 398 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 CRYGBP07316 175 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 CD7P09564 240 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 FOLR2P14207 255 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 MC5RP33032 325 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 POLR2GP62487 172 aaKnown RBP eCLIP6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 NHLH2Q02577 135 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 FXYD3Q14802 87 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 ZNF343Q6P1L6 599 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 GTSCR1Q86UQ5 136 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 STX12Q86Y82 276 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 DEFB125Q8N687 156 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 BSCL2Q96G97 398 aaPredicted RBP6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 C5orf30Q96GV9 206 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 ATP5SQ99766 215 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 PARD6GQ9BYG4 376 aaPredicted RBP6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 COA4Q9NYJ1 87 aa6.93□□□□□ -1.3
CHMP4A-205ENST00000531158 FAM24AA6NFZ4 105 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 H3BUA1 57 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 BMPR1BO00238 502 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 ITGB1BP1O14713 200 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 NUPL2O15504 423 aaKnown RBP6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 SCAF4O95104 1147 aaKnown RBP6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 HBE1P02100 147 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 PRH1P02810 166 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 APELAP0DMC3 54 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 ATP6V0CP27449 155 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 NPBWR1P48145 328 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 TAS2R30P59541 319 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 CD81P60033 236 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 RHEBQ15382 184 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 GUK1Q16774 197 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 CD300EQ496F6 205 aaPredicted RBP6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 LCN12Q6JVE5 192 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 TMEM182Q6ZP80 229 aaPredicted RBP6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 C15orf54Q8N8G6 183 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 HSD17B11Q8NBQ5 300 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 OR5C1Q8NGR4 320 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 RNF5Q99942 180 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 SCRT1Q9BWW7 348 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 SH3BGRL3Q9H299 93 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 TUBA4BQ9H853 241 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 SMCO4Q9NRQ5 59 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 ZNF355PQ9NSJ1 428 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 PEF1Q9UBV8 284 aaKnown RBP6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 DMRT1Q9Y5R6 373 aa6.92□□□□□ -1.3
CHMP4A-205ENST00000531158 SRRM4A7MD48 611 aaKnown RBP6.91□□□□□ -1.3
CHMP4A-205ENST00000531158 IGLV2-14P01704 120 aa6.91□□□□□ -1.3
CHMP4A-205ENST00000531158 SULT1A1P50225 295 aa6.91□□□□□ -1.3
CHMP4A-205ENST00000531158 PPT1P50897 306 aa6.91□□□□□ -1.3
CHMP4A-205ENST00000531158 CATR1Q13166 79 aa6.91□□□□□ -1.3
CHMP4A-205ENST00000531158 CBLN2Q8IUK8 224 aa6.91□□□□□ -1.3
CHMP4A-205ENST00000531158 ZNF645Q8N7E2 425 aa6.91□□□□□ -1.3
CHMP4A-205ENST00000531158 RNASE11Q8TAA1 199 aaKnown RBP6.91□□□□□ -1.3
CHMP4A-205ENST00000531158 FAM213BQ8TBF2 198 aa6.91□□□□□ -1.3
CHMP4A-205ENST00000531158 GPR146Q96CH1 333 aa6.91□□□□□ -1.3
CHMP4A-205ENST00000531158 PSMG3Q9BT73 122 aaPredicted RBP6.91□□□□□ -1.3
CHMP4A-205ENST00000531158 SELENOKQ9Y6D0 94 aa6.91□□□□□ -1.3
CHMP4A-205ENST00000531158 TRAV1-1A0A0B4J248 108 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 A0A0G2JLM5 398 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 A0A0G2JRQ6 117 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 AGPAT2O15120 278 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 TNFSF12O43508 249 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 SYNGR2O43760 224 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 TMEM50AO95807 157 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 LY6G6CO95867 125 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 IGKV1-39P01597 117 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 IGKV1D-39P04432 117 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 CEACAM6P40199 344 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 PAX9P55771 341 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 RAB2AP61019 212 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 RPS16P62249 146 aaKnown RBP6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 CLINT1Q14677 625 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 AKR1C8PQ5T2L2 129 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 TMEM88Q6PEY1 159 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 PDPNQ86YL7 162 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 RPP25LQ8N5L8 163 aaKnown RBP6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 OR2G3Q8NGZ4 309 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 OR51H1Q8NH63 302 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 IL17DQ8TAD2 202 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 SLC35B3Q9H1N7 401 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 SRD5A3Q9H8P0 318 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 MLXQ9UH92 298 aa6.9□□□□□ -1.3
CHMP4A-205ENST00000531158 C9JQL5 133 aa6.89□□□□□ -1.31
CHMP4A-205ENST00000531158 NDUFS6O75380 124 aaKnown RBP6.89□□□□□ -1.31
CHMP4A-205ENST00000531158 CNIH1O95406 144 aa6.89□□□□□ -1.31
CHMP4A-205ENST00000531158 IFNA5P01569 189 aa6.89□□□□□ -1.31
CHMP4A-205ENST00000531158 IGKV1-5P01602 117 aa6.89□□□□□ -1.31
CHMP4A-205ENST00000531158 HBG1P69891 147 aa6.89□□□□□ -1.31
CHMP4A-205ENST00000531158 HBG2P69892 147 aa6.89□□□□□ -1.31
CHMP4A-205ENST00000531158 EIF4EBP1Q13541 118 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms