RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 APOBEC3AP31941 199 aaPredicted RBP9.4□□□□□ -0.9
USP35-207ENST00000530546 PET117Q6UWS5 81 aa9.4□□□□□ -0.9
USP35-207ENST00000530546 MMD2Q8IY49 270 aa9.4□□□□□ -0.9
USP35-207ENST00000530546 CLUHP3Q96NS8 147 aa9.4□□□□□ -0.9
USP35-207ENST00000530546 TMEM204Q9BSN7 226 aa9.4□□□□□ -0.9
USP35-207ENST00000530546 NAT8BQ9UHF3 227 aa9.4□□□□□ -0.9
USP35-207ENST00000530546 ZZEF1O43149 2961 aa9.4□□□□□ -0.91
USP35-207ENST00000530546 DSCAML1Q8TD84 2053 aa9.4□□□□□ -0.91
USP35-207ENST00000530546 CT45A6P0DMU7 189 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 CT45A5P0DMU8 189 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 CT45A7P0DMV0 189 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 CD1BP29016 333 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 VDAC2P45880 294 aaPredicted RBP9.39□□□□□ -0.91
USP35-207ENST00000530546 GCSAMLQ5JQS6 135 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 ZNF596Q8TC21 504 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 ZNF714Q96N38 554 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 TANC2Q9HCD6 1990 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 C9JCJ5 164 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 PRB3Q04118 309 aaPredicted RBP9.39□□□□□ -0.91
USP35-207ENST00000530546 SLC25A48Q6ZT89 311 aaKnown RBP9.39□□□□□ -0.91
USP35-207ENST00000530546 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.39□□□□□ -0.91
USP35-207ENST00000530546 TNFRSF14Q92956 283 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 RCHY1Q96PM5 261 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 CTSZQ9UBR2 303 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 ABCA4P78363 2273 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 C15orf61A6NNL5 157 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 H0YJW9 148 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 TAX1BP3O14907 124 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 FAM71F2Q6NXP2 309 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 MRPL20Q9BYC9 149 aaKnown RBP9.39□□□□□ -0.91
USP35-207ENST00000530546 ENY2Q9NPA8 101 aa9.39□□□□□ -0.91
USP35-207ENST00000530546 SRRM4A7MD48 611 aaKnown RBP9.38□□□□□ -0.91
USP35-207ENST00000530546 S100A7P31151 101 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 CX3CL1P78423 397 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 ST6GALNAC3Q8NDV1 305 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 TSKUQ8WUA8 353 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 FAM216AQ8WUB2 273 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 ADTRPQ96IZ2 230 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 MS4A5Q9H3V2 200 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 A0A1W2PPV4 95 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 FAM90A9PA6NNJ1 464 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 SLC17A3O00476 420 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 HLA-DQA1P01909 254 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 DLX1P56177 255 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 CDSNQ15517 529 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 TMEM136Q6ZRR5 245 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 DEFB125Q8N687 156 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 CLEC7AQ9BXN2 247 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 OR51B2Q9Y5P1 312 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 CHD8Q9HCK8 2581 aa9.38□□□□□ -0.91
USP35-207ENST00000530546 TET2Q6N021 2002 aaPredicted RBP9.37□□□□□ -0.91
USP35-207ENST00000530546 CA7P43166 264 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 HSPE1P61604 102 aaKnown RBP9.37□□□□□ -0.91
USP35-207ENST00000530546 DIAPH2-AS1Q14236 149 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 RTL8BQ17RB0 113 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 TCF24Q7RTU0 167 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 LHFPL4Q7Z7J7 247 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 OR52E5Q8NH55 327 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 WDR83OSQ9Y284 106 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 SCO2A0A1W2PP80 73 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 GAGE12BA1L429 117 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 K7EN84 100 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 CORTO00230 105 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 OR10J4P0C629 311 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 MEF2CQ06413 473 aaPredicted RBP9.37□□□□□ -0.91
USP35-207ENST00000530546 OR10X1Q8NGY0 326 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 SSMEM1Q8WWF3 244 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 LINC00574Q9H8X3 128 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 V9GYV3 84 aa9.37□□□□□ -0.91
USP35-207ENST00000530546 CXorf1O96002 111 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 LINC00869P0C866 280 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 IGLL1P15814 213 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 NPY1RP25929 384 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 UCNP55089 124 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 SSX8Q7RTT4 187 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 OR8I2Q8N0Y5 310 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 ATOH7Q8N100 152 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 ZNF430Q9H8G1 570 aaPredicted RBP9.36□□□□□ -0.91
USP35-207ENST00000530546 ANKHD1Q8IWZ3 2542 aaKnown RBP9.36□□□□□ -0.91
USP35-207ENST00000530546 NCOR2Q9Y618 2525 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 ARFGEF3Q5TH69 2177 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 TNCP24821 2201 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 SRIP30626 198 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 KLRB1Q12918 225 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 PDLIM3Q53GG5 364 aaPredicted RBP9.36□□□□□ -0.91
USP35-207ENST00000530546 MIC13Q5XKP0 118 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 TREML4Q6UXN2 200 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 C12orf54Q6X4T0 127 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 C11orf52Q96A22 123 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 MEGF9Q9H1U4 602 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 ST20Q9HBF5 79 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 FOXA2Q9Y261 457 aaPredicted RBP9.36□□□□□ -0.91
USP35-207ENST00000530546 AMY1AP04745 511 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 LOXP28300 417 aaPredicted RBP9.36□□□□□ -0.91
USP35-207ENST00000530546 OR8B3Q8NGG8 313 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 HARBI1Q96MB7 349 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 OR8B2Q96RD0 313 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 TMEM14BQ9NUH8 114 aa9.36□□□□□ -0.91
USP35-207ENST00000530546 B9A039 149 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 BMPR1BO00238 502 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 350.5 ms