RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 LCN2P80188 198 aa10.15□□□□□ -0.78
SCN3B-206ENST00000530277 DPRXA6NFQ7 191 aa10.15□□□□□ -0.79
SCN3B-206ENST00000530277 PRSS8Q16651 343 aa10.15□□□□□ -0.79
SCN3B-206ENST00000530277 BOD1L1Q8NFC6 3051 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 TNFSF13O75888 250 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 PMCHL1Q16048 86 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 UTF1Q5T230 341 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 TEX38Q6PEX7 206 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 SMIM15Q7Z3B0 74 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 A0A0G2JNJ9 132 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 CEACAM3P40198 252 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 LY6DQ14210 128 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 TMEM200BQ69YZ2 307 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 S100A7AQ86SG5 101 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 CHRDL1Q9BU40 450 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 Q9UFV3 132 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 NACAE9PAV3 2078 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 CEACAM1P13688 526 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 ERVK11-1P61568 191 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 ZNF664Q8N3J9 261 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 NDFIP1Q9BT67 221 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 RPUSD1Q9UJJ7 312 aaKnown RBP10.14□□□□□ -0.79
SCN3B-206ENST00000530277 TBL2Q9Y4P3 447 aaKnown RBP10.14□□□□□ -0.79
SCN3B-206ENST00000530277 KLF2Q9Y5W3 355 aaPredicted RBP10.14□□□□□ -0.79
SCN3B-206ENST00000530277 LRRK2Q5S007 2527 aa10.14□□□□□ -0.79
SCN3B-206ENST00000530277 MC5RP33032 325 aa10.13□□□□□ -0.79
SCN3B-206ENST00000530277 KLRD1Q13241 179 aa10.13□□□□□ -0.79
SCN3B-206ENST00000530277 LY6EQ16553 131 aa10.13□□□□□ -0.79
SCN3B-206ENST00000530277 TMEM144Q7Z5S9 345 aa10.13□□□□□ -0.79
SCN3B-206ENST00000530277 RNASE6Q93091 150 aaKnown RBP10.13□□□□□ -0.79
SCN3B-206ENST00000530277 MCRIP2Q9BUT9 160 aaKnown RBP10.13□□□□□ -0.79
SCN3B-206ENST00000530277 RAXQ9Y2V3 346 aa10.13□□□□□ -0.79
SCN3B-206ENST00000530277 CLEC7AQ9BXN2 247 aa10.13□□□□□ -0.79
SCN3B-206ENST00000530277 SH2D7A6NKC9 451 aaPredicted RBP10.13□□□□□ -0.79
SCN3B-206ENST00000530277 M0QZ24 198 aa10.13□□□□□ -0.79
SCN3B-206ENST00000530277 AREGP15514 252 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 MAS1LP35410 378 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 PPOXP50336 477 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 SPATA45Q537H7 98 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 KLHDC1Q8N7A1 406 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 LINC00312Q9Y6C7 94 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 NUP210LQ5VU65 1888 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 F2RL2O00254 374 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 VENTXO95231 258 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 Q6ZS49 121 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 GBGT1Q8N5D6 347 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 OSR1Q8TAX0 266 aaPredicted RBP10.12□□□□□ -0.79
SCN3B-206ENST00000530277 TMEM186Q96B77 213 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 IL36BQ9NZH7 164 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 HIGD1CA8MV81 97 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 NPSP0C0P6 89 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 STAG3L2P0CL84 134 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 STAG3L3P0CL85 134 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 C11orf53Q8IXP5 236 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 OR52E5Q8NH55 327 aa10.12□□□□□ -0.79
SCN3B-206ENST00000530277 TRBV6-6A0A0A6YYG2 114 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.11□□□□□ -0.79
SCN3B-206ENST00000530277 SPACA3Q8IXA5 215 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 THYN1Q9P016 225 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 A8MWL6 223 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 CNTFRP26992 372 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 LGALS7P47929 136 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 CD69Q07108 199 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 ADIPOQQ15848 244 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 IGFL4Q6B9Z1 124 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 ASCL5Q7RTU5 278 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 EXOC3-AS1Q8N2X6 119 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 CEP192Q8TEP8 1941 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 PEX7O00628 323 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 IGHG3P01860 377 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 SELENOTP62341 195 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 MSMPQ1L6U9 139 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 LCN12Q6JVE5 192 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 DEFB104AQ8WTQ1 72 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 KCNS1Q96KK3 526 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 GAFA1Q96PS6 74 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 NDUFAF3Q9BU61 184 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 TPSG1Q9NRR2 321 aa10.11□□□□□ -0.79
SCN3B-206ENST00000530277 TRBV24-1A0A075B6N3 115 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 FOLR2P14207 255 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 C10orf91Q5T1B1 145 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 UNQ5815/PRO19632Q6UWF5 114 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 C1orf174Q8IYL3 243 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 OR4A5Q8NH83 315 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 TRAV1-1A0A0B4J248 108 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 SRRM4A7MD48 611 aaKnown RBP10.1□□□□□ -0.79
SCN3B-206ENST00000530277 PRSS1P07477 247 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 PPIFP30405 207 aaKnown RBP10.1□□□□□ -0.79
SCN3B-206ENST00000530277 APOBEC3AP31941 199 aaPredicted RBP10.1□□□□□ -0.79
SCN3B-206ENST00000530277 MBNL2Q5VZF2 373 aaKnown RBP10.1□□□□□ -0.79
SCN3B-206ENST00000530277 TMEM170AQ8WVE7 144 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 FAM215AQ9Y5M1 114 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 ISLRO14498 428 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 GCGP01275 180 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 PRCDQ00LT1 54 aa10.1□□□□□ -0.79
SCN3B-206ENST00000530277 SRSF7Q16629 238 aaKnown RBP eCLIP10.1□□□□□ -0.79
SCN3B-206ENST00000530277 TIMM23O14925 209 aa10.09□□□□□ -0.79
SCN3B-206ENST00000530277 UQCRFS1P47985 274 aa10.09□□□□□ -0.79
SCN3B-206ENST00000530277 NUTF2P61970 127 aaKnown RBP10.09□□□□□ -0.79
SCN3B-206ENST00000530277 BPIFA4PQ86YQ2 179 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms