RNA–Protein interactions for RNA: ENST00000529999.5

PUF60-215, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-215	ENST00000529999	NPBWR1	P48145	328 aa		11.12	□□□□□ -0.63
PUF60-215	ENST00000529999	RUNX1	Q01196	453 aa		11.12	□□□□□ -0.63
PUF60-215	ENST00000529999	LAMTOR1	Q6IAA8	161 aa		11.12	□□□□□ -0.63
PUF60-215	ENST00000529999	TMUB2	Q71RG4	321 aa		11.12	□□□□□ -0.63
PUF60-215	ENST00000529999	C9orf62	Q8N4C0	152 aa		11.12	□□□□□ -0.63
PUF60-215	ENST00000529999	CCDC140	Q96MF4	163 aa		11.12	□□□□□ -0.63
PUF60-215	ENST00000529999	ATP5S	Q99766	215 aa		11.12	□□□□□ -0.63
PUF60-215	ENST00000529999	CITED2	Q99967	270 aa	Predicted RBP	11.12	□□□□□ -0.63
PUF60-215	ENST00000529999	MRPL36	Q9P0J6	103 aa	Known RBP	11.12	□□□□□ -0.63
PUF60-215	ENST00000529999	FBXL17	Q9UF56	701 aa		11.12	□□□□□ -0.63
PUF60-215	ENST00000529999	TRAV30	A0A087WSZ9	112 aa		11.11	□□□□□ -0.63
PUF60-215	ENST00000529999	IGHV3-21	A0A0B4J1V1	117 aa		11.11	□□□□□ -0.63
PUF60-215	ENST00000529999	CLN5	O75503	358 aa		11.11	□□□□□ -0.63
PUF60-215	ENST00000529999	RND2	P52198	227 aa		11.11	□□□□□ -0.63
PUF60-215	ENST00000529999	AP2S1	P53680	142 aa	Predicted RBP	11.11	□□□□□ -0.63
PUF60-215	ENST00000529999	DEFA5	Q01523	94 aa		11.11	□□□□□ -0.63
PUF60-215	ENST00000529999	ACSM6	Q6P461	480 aa		11.11	□□□□□ -0.63
PUF60-215	ENST00000529999	THAP8	Q8NA92	274 aa		11.11	□□□□□ -0.63
PUF60-215	ENST00000529999	NPIPB3	Q92617	1050 aa		11.11	□□□□□ -0.63
PUF60-215	ENST00000529999	WFDC1	Q9HC57	220 aa		11.11	□□□□□ -0.63
PUF60-215	ENST00000529999	WDR83OS	Q9Y284	106 aa		11.11	□□□□□ -0.63
PUF60-215	ENST00000529999	LSM4	Q9Y4Z0	139 aa	Known RBP	11.11	□□□□□ -0.63
PUF60-215	ENST00000529999	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	BOLA2-SMG1P6	H3BVE0	249 aa		11.1	□□□□□ -0.63
PUF60-215	ENST00000529999		I3L521	148 aa		11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	MPDU1	O75352	247 aa		11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	IGHV3-48	P01763	117 aa		11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	LGALS1	P09382	135 aa	Known RBP	11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	ZNF266	Q14584	549 aa		11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	CLINT1	Q14677	625 aa		11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	DEFB121	Q5J5C9	76 aa		11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	SPSB3	Q6PJ21	355 aa		11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	TEPP	Q6URK8	271 aa		11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	ARPC5L	Q9BPX5	153 aa		11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	ARL6	Q9H0F7	186 aa		11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	NBEAL2	Q6ZNJ1	2754 aa		11.1	□□□□□ -0.63
PUF60-215	ENST00000529999	IGKV1OR2-108	A0A075B7D4	117 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	TCRBV4S1A1T	A0A5B7	111 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	BCL2L11	O43521	198 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	GNG7	O60262	68 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	CTSG	P08311	255 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	IGLL1	P15814	213 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	NKX2-5	P52952	324 aa	Predicted RBP	11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	AKR1C1	Q04828	323 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	UBAC2	Q8NBM4	344 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	C4orf3	Q8WVX3	66 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	ACY3	Q96HD9	319 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	TRGV9	Q99603	122 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	SMIM3	Q9BZL3	60 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	WDR61	Q9GZS3	305 aa	Known RBP	11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	GNB4	Q9HAV0	340 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	CYTL1	Q9NRR1	136 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999		S4R3C0	116 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	DNAH3	Q8TD57	4116 aa		11.09	□□□□□ -0.63
PUF60-215	ENST00000529999	IGKV1D-37	A0A075B6S9	117 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	KANTR	A0A1W2PQU2	76 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999		A0A1W2PRX2	142 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	SMCO3	A2RU48	225 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	ADARB2-AS1	A8MUL3	147 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	SCGB2A1	O75556	95 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	JTB	O76095	146 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	IFNA5	P01569	189 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	IGHV3-11	P01762	117 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	CLEC3B	P05452	202 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	IGLC1	P0CG04	106 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	C4BPB	P20851	252 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999		Q56UQ5	140 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	CLEC19A	Q6UXS0	136 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	WFDC9	Q8NEX5	89 aa		11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	PEF1	Q9UBV8	284 aa	Known RBP	11.08	□□□□□ -0.64
PUF60-215	ENST00000529999	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.07	□□□□□ -0.64
PUF60-215	ENST00000529999	UBE2L5P	A0A1B0GUS4	154 aa		11.07	□□□□□ -0.64
PUF60-215	ENST00000529999	OR2T8	A6NH00	312 aa		11.07	□□□□□ -0.64
PUF60-215	ENST00000529999	TGOLN2	O43493	480 aa		11.07	□□□□□ -0.64
PUF60-215	ENST00000529999	IGKV1-17	P01599	117 aa		11.07	□□□□□ -0.64
PUF60-215	ENST00000529999	IGHV3-23	P01764	117 aa		11.07	□□□□□ -0.64
PUF60-215	ENST00000529999	OR10J1	P30954	320 aa		11.07	□□□□□ -0.64
PUF60-215	ENST00000529999	YPEL3	P61236	119 aa	Predicted RBP	11.07	□□□□□ -0.64
PUF60-215	ENST00000529999	OPCML	Q14982	345 aa		11.07	□□□□□ -0.64
PUF60-215	ENST00000529999	BTNL8	Q6UX41	500 aa		11.07	□□□□□ -0.64
PUF60-215	ENST00000529999	ARV1	Q9H2C2	271 aa		11.07	□□□□□ -0.64
PUF60-215	ENST00000529999		K7EIL1	84 aa		11.06	□□□□□ -0.64
PUF60-215	ENST00000529999	NUPL2	O15504	423 aa	Known RBP	11.06	□□□□□ -0.64
PUF60-215	ENST00000529999	HSPB1	P04792	205 aa	Known RBP	11.06	□□□□□ -0.64
PUF60-215	ENST00000529999	GPR183	P32249	361 aa		11.06	□□□□□ -0.64
PUF60-215	ENST00000529999	ADM	P35318	185 aa		11.06	□□□□□ -0.64
PUF60-215	ENST00000529999	ARL3	P36405	182 aa		11.06	□□□□□ -0.64
PUF60-215	ENST00000529999	SELENOT	P62341	195 aa		11.06	□□□□□ -0.64
PUF60-215	ENST00000529999	RAB31	Q13636	194 aa		11.06	□□□□□ -0.64
PUF60-215	ENST00000529999	RPL7L1	Q6DKI1	246 aa	Known RBP	11.06	□□□□□ -0.64
PUF60-215	ENST00000529999	STOML3	Q8TAV4	291 aa		11.06	□□□□□ -0.64
PUF60-215	ENST00000529999	MGST2	Q99735	147 aa		11.06	□□□□□ -0.64
PUF60-215	ENST00000529999	CHRDL1	Q9BU40	450 aa		11.06	□□□□□ -0.64
PUF60-215	ENST00000529999	ZFP92	A6NM28	416 aa		11.05	□□□□□ -0.64
PUF60-215	ENST00000529999	BMPR1B	O00238	502 aa		11.05	□□□□□ -0.64
PUF60-215	ENST00000529999	AGPAT2	O15120	278 aa		11.05	□□□□□ -0.64
PUF60-215	ENST00000529999	GGCT	O75223	188 aa	Known RBP	11.05	□□□□□ -0.64
PUF60-215	ENST00000529999	TRBV12-3	P01733	135 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms