RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 CELA3BP08861 270 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 SAA2P0DJI9 122 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-223ENST00000529986 SNRPD3P62318 126 aaKnown RBP6.36□□□□□ -1.39
CTNND1-223ENST00000529986 SRSF1Q07955 248 aaKnown RBP eCLIP6.36□□□□□ -1.391e-7■□□□□ 10.7
CTNND1-223ENST00000529986 SHISA5Q8N114 240 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 DPH3Q96FX2 82 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 TMEM101Q96IK0 257 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 MS4A6AQ9H2W1 248 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 CHODLQ9H9P2 273 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 C21orf62Q9NYP8 219 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 PSG8Q9UQ74 426 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 POLR3KQ9Y2Y1 108 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-223ENST00000529986 AKAP6Q13023 2319 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 LOC105371242A0A075B767 164 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 NPIPB13A6NJU9 1138 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 NPIPB5A8MRT5 1133 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 RAB9AP51151 201 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 RPP25LQ8N5L8 163 aaKnown RBP6.36□□□□□ -1.39
CTNND1-223ENST00000529986 SPANXCQ9NY87 97 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 SLC25A15Q9Y619 301 aa6.36□□□□□ -1.39
CTNND1-223ENST00000529986 TDRD6O60522 2096 aaKnown RBP6.36□□□□□ -1.39
CTNND1-223ENST00000529986 FABP5P3A8MUU1 101 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 D6R8Y8 96 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 HAX1O00165 279 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 CD24P25063 80 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 HIST1H4AP62805 103 aaKnown RBP6.35□□□□□ -1.39
CTNND1-223ENST00000529986 ADAMTSL5Q6ZMM2 481 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 ERG28Q9UKR5 140 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 DOCK3Q8IZD9 2030 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 IGHV1-69-2A0A0G2JMI3 117 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 PSG3Q16557 428 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 ATP5L2Q7Z4Y8 100 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 EDA2RQ9HAV5 297 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 NYNRINQ9P2P1 1898 aaKnown RBP6.35□□□□□ -1.39
CTNND1-223ENST00000529986 MPDZO75970 2070 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 CCL3L1P16619 93 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 PSG7Q13046 419 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 CACNG8Q8WXS5 425 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 COX11Q9Y6N1 276 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 A0A0G2JMM0 328 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 A0A1W2PPB8 328 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 KIR3DP1A8MWS1 328 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 H7C1H1 209 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 DUX3Q96PT4 197 aa6.35□□□□□ -1.39
CTNND1-223ENST00000529986 RBMY1BA6NDE4 496 aaKnown RBP6.34□□□□□ -1.39
CTNND1-223ENST00000529986 RBMY1EA6NEQ0 496 aaKnown RBP6.34□□□□□ -1.39
CTNND1-223ENST00000529986 C15orf61A6NNL5 157 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 UPK2O00526 184 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 RBMY1DP0C7P1 496 aaKnown RBP6.34□□□□□ -1.39
CTNND1-223ENST00000529986 RBMY1A1P0DJD3 496 aaKnown RBP6.34□□□□□ -1.39
CTNND1-223ENST00000529986 RBMY1CP0DJD4 496 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 TREML4Q6UXN2 200 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 RNF182Q8N6D2 247 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 C1QTNF5Q9BXJ0 243 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 CST9LQ9H4G1 147 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 SEPSECSQ9HD40 501 aaKnown RBP6.34□□□□□ -1.39
CTNND1-223ENST00000529986 WDR83OSQ9Y284 106 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 AHRRA9YTQ3 701 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 IFNL4K9M1U5 179 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 NDUFA2O43678 99 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 LYPD3O95274 346 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 IGHV3-11P01762 117 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 CD7P09564 240 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 CECR9P0C854 216 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 OR9G4Q8NGQ1 327 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 ZNF48Q96MX3 618 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-223ENST00000529986 ZNF703Q9H7S9 590 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-223ENST00000529986 CHCHD2Q9Y6H1 151 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-223ENST00000529986 TNFRSF6BO95407 300 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 TMEM249Q2WGJ8 235 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 RNF144BQ7Z419 303 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 ASCL2Q99929 193 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 NXT2Q9NPJ8 142 aaKnown RBP6.34□□□□□ -1.39
CTNND1-223ENST00000529986 IFI27P40305 119 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-223ENST00000529986 FAM89BQ8N5H3 189 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 SPANXDQ9BXN6 97 aa6.34□□□□□ -1.39
CTNND1-223ENST00000529986 TDGF1P13385 188 aa6.34□□□□□ -1.4
CTNND1-223ENST00000529986 EXOC3-AS1Q8N2X6 119 aa6.34□□□□□ -1.4
CTNND1-223ENST00000529986 ITLN2Q8WWU7 325 aaPredicted RBP6.34□□□□□ -1.4
CTNND1-223ENST00000529986 SIGLEC12Q96PQ1 595 aa6.34□□□□□ -1.4
CTNND1-223ENST00000529986 AGMATQ9BSE5 352 aa6.34□□□□□ -1.4
CTNND1-223ENST00000529986 SYS1-DBNDD2H3BUS1 97 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 M0R2P5 195 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 WBP1Q96G27 269 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 GGTLC1Q9BX51 225 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 IGKV1-12A0A0C4DH73 117 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 TCRBV4S1A1TA0A5B7 111 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 IGKV1D-12P01611 117 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 NUP35Q8NFH5 326 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 TP53BP1Q12888 1972 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-223ENST00000529986 IGKV2-40A0A087WW87 121 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-223ENST00000529986 IGKV2D-40P01614 121 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-223ENST00000529986 IGHV2-70P01814 119 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 TCRAP04437 139 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 PDLIM4P50479 330 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 SSBP2P81877 361 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-223ENST00000529986 ATXN8Q156A1 80 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 FAM231BA6NCW3 169 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 PLNP26678 52 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 FAM27E3Q08E93 113 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms