RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 SAA1P0DJI8 122 aaPredicted RBP3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 PSMA1P25786 263 aaKnown RBP3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 KIR2DS2P43631 304 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 PSMD7P51665 324 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 CLDN12P56749 244 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 ZNF45Q02386 682 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 CDK10Q15131 360 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 C15orf32Q32M92 178 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 FAM74A3Q4VXF1 159 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 MUC21Q5SSG8 566 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 ZNF57Q68EA5 555 aaPredicted RBP3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 IDO2Q6ZQW0 420 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 TTC9CQ8N5M4 171 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 SAMD12Q8N8I0 201 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 STXBP6Q8NFX7 210 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 TMEM203Q969S6 136 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 DCUN1D5Q9BTE7 237 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 ST6GALNAC5Q9BVH7 336 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 GGTLC1Q9BX51 225 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 WFDC10AQ9H1F0 79 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 VCXQ9H320 206 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 ZNF430Q9H8G1 570 aaPredicted RBP3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 SCN3BQ9NY72 215 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 ZNF257Q9Y2Q1 563 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 LSM2Q9Y333 95 aaKnown RBP3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 PRELID3BQ9Y3B1 194 aa3.72□□□□□ -1.81
AMBRA1-209ENST00000529963 LOC102724200A0A096LPH7 203 aaPredicted RBP3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 NUPR2A6NF83 97 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 PPP5D1E7EU14 171 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 PDCD5O14737 125 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 SLC22A5O76082 557 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 LY6G6CO95867 125 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 DHFRP00374 187 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 HLA-AP01891 365 aaKnown RBP3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 HSMCR30P0CW71 290 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 CD36P16671 472 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 TALDO1P37837 337 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 RPL27AP46776 148 aaKnown RBP3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 RPS25P62851 125 aaKnown RBP3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 ARFRP1Q13795 201 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 ARL6IP1Q15041 203 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 SSX1Q16384 188 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 IZUMO2Q6UXV1 221 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 TMEM91Q6ZNR0 172 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 GPHB5Q86YW7 130 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 H1FOOQ8IZA3 346 aaPredicted RBP3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 SLC38A6Q8IZM9 456 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 ZNF645Q8N7E2 425 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 OR10R2Q8NGX6 335 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 VSTM2AQ8TAG5 236 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 MAFIPQ8WZ33 124 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 EEF1AKMT3Q96AZ1 226 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 PARLQ9H300 379 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 VCX3BQ9H321 246 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 V9GY05 133 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.82
AMBRA1-209ENST00000529963 A0A075B6Q4 140 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 TRAV25A0A0B4J276 109 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 TRBV7-9A0A0J9YWB2 115 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 A8MWP6 167 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 MFNGO00587 321 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 HIST1H1BP16401 226 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 HIST1H1DP16402 221 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 CBLN1P23435 193 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 DTYMKP23919 212 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 MAS1LP35410 378 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 APOC4P55056 127 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 AQP4P55087 323 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 EWSR1Q01844 656 aaKnown RBP eCLIP3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 MLLT11Q13015 90 aaPredicted RBP3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 C10orf55Q5SWW7 151 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 HES5Q5TA89 166 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 OGFRL1Q5TC84 451 aaPredicted RBP3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 KCNIP4Q6PIL6 250 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 CLEC19AQ6UXS0 136 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 Q6ZS49 121 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 TMEM61Q8N0U2 210 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 OR1B1Q8NGR6 318 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 OR4S2Q8NH73 311 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 CACNG8Q8WXS5 425 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 MARC2Q969Z3 335 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 OR2A7Q96R45 310 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 HSD17B10Q99714 261 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 OR51E2Q9H255 320 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 ACOT13Q9NPJ3 140 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 SLC2A9Q9NRM0 540 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 TP53TG1Q9Y2A0 90 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 KLK5Q9Y337 293 aaPredicted RBP3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 RBMX2Q9Y388 322 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 TPRKBQ9Y3C4 175 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 KMT2AQ03164 3969 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 TRBV7-1A0A0A6YYK4 115 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 TMEM213A2RRL7 107 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 J3QRK9 145 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 CASQ2O14958 399 aaPredicted RBP3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 KBTBD11O94819 623 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 HRASP01112 189 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 IGHV3-23P01764 117 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 HLA-DQB1P01920 261 aa3.7□□□□□ -1.82
AMBRA1-209ENST00000529963 CRYGCP07315 174 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms