RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 UNQ9165/PRO28630Q6UXU0 137 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 GSG1LQ6UXU4 331 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 STPG3Q8N7X2 389 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 SLC24A4Q8NFF2 622 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 VN1R17PQ8TDU5 208 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 LINC00476Q8WZB0 136 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 C20orf24Q9BUV8 137 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 RBKSQ9H477 322 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 C21orf62Q9NYP8 219 aa9.08□□□□□ -0.96
USH1C-208ENST00000529563 KLK5Q9Y337 293 aaPredicted RBP9.08□□□□□ -0.96
USH1C-208ENST00000529563 OR2T8A6NH00 312 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 L7N2F9 121 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 GNG7O60262 68 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 NPY1RP25929 384 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 BMI1P35226 326 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 NPBWR1P48145 328 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 MFAP4P55083 255 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 ELLP55199 621 aaPredicted RBP9.07□□□□□ -0.96
USH1C-208ENST00000529563 VAMP2P63027 116 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 RGS21Q2M5E4 152 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 DEFB135Q30KP9 77 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 ETFRF1Q6IPR1 90 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 TMEM217Q8N7C4 229 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 ZNF114Q8NC26 417 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 ZNF502Q8TBZ5 544 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 SPAG8Q99932 426 aaPredicted RBP9.07□□□□□ -0.96
USH1C-208ENST00000529563 HSPB7Q9UBY9 170 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 U3KQ87 197 aa9.07□□□□□ -0.96
USH1C-208ENST00000529563 SNRPGP15A8MWD9 76 aa9.06□□□□□ -0.96
USH1C-208ENST00000529563 INS-IGF2F8WCM5 200 aa9.06□□□□□ -0.96
USH1C-208ENST00000529563 UBE2CO00762 179 aa9.06□□□□□ -0.96
USH1C-208ENST00000529563 NUPL2O15504 423 aaKnown RBP9.06□□□□□ -0.96
USH1C-208ENST00000529563 TGOLN2O43493 480 aa9.06□□□□□ -0.96
USH1C-208ENST00000529563 SYNGR2O43760 224 aa9.06□□□□□ -0.96
USH1C-208ENST00000529563 MT-CO2P00403 227 aa9.06□□□□□ -0.96
USH1C-208ENST00000529563 IAPPP10997 89 aa9.06□□□□□ -0.96
USH1C-208ENST00000529563 RPL35AP18077 110 aaKnown RBP9.06□□□□□ -0.96
USH1C-208ENST00000529563 PVALBP20472 110 aaPredicted RBP9.06□□□□□ -0.96
USH1C-208ENST00000529563 ATP5IP56385 69 aaPredicted RBP9.06□□□□□ -0.96
USH1C-208ENST00000529563 MAGT1Q9H0U3 335 aa9.06□□□□□ -0.96
USH1C-208ENST00000529563 TP53TG1Q9Y2A0 90 aa9.06□□□□□ -0.96
USH1C-208ENST00000529563 OR4C46A6NHA9 309 aa9.05□□□□□ -0.96
USH1C-208ENST00000529563 CCSO14618 274 aa9.05□□□□□ -0.96
USH1C-208ENST00000529563 RNASE2P10153 161 aaKnown RBP9.05□□□□□ -0.96
USH1C-208ENST00000529563 AARDQ4LEZ3 155 aa9.05□□□□□ -0.96
USH1C-208ENST00000529563 SPSB3Q6PJ21 355 aa9.05□□□□□ -0.96
USH1C-208ENST00000529563 Q6ZWC4 215 aa9.05□□□□□ -0.96
USH1C-208ENST00000529563 RNASEH2CQ8TDP1 164 aaKnown RBP9.05□□□□□ -0.96
USH1C-208ENST00000529563 SCARB1Q8WTV0 552 aa9.05□□□□□ -0.96
USH1C-208ENST00000529563 BSCL2Q96G97 398 aaPredicted RBP9.05□□□□□ -0.96
USH1C-208ENST00000529563 TXN2Q99757 166 aa9.05□□□□□ -0.96
USH1C-208ENST00000529563 MARVELD1Q9BSK0 173 aa9.05□□□□□ -0.96
USH1C-208ENST00000529563 DAZ1Q9NQZ3 744 aaKnown RBP9.05□□□□□ -0.96
USH1C-208ENST00000529563 STRAPQ9Y3F4 350 aaKnown RBP9.05□□□□□ -0.96
USH1C-208ENST00000529563 GOSR2O14653 212 aa9.04□□□□□ -0.96
USH1C-208ENST00000529563 TSPAN4O14817 238 aa9.04□□□□□ -0.96
USH1C-208ENST00000529563 ZNF207O43670 478 aaKnown RBP9.04□□□□□ -0.96
USH1C-208ENST00000529563 SSSCA1O60232 199 aa9.04□□□□□ -0.96
USH1C-208ENST00000529563 YIF1AO95070 293 aa9.04□□□□□ -0.96
USH1C-208ENST00000529563 RLN2P04090 185 aa9.04□□□□□ -0.96
USH1C-208ENST00000529563 C8orf88P0DMB2 117 aa9.04□□□□□ -0.96
USH1C-208ENST00000529563 S100A10P60903 97 aa9.04□□□□□ -0.96
USH1C-208ENST00000529563 RELQ04864 619 aaPredicted RBP9.04□□□□□ -0.96
USH1C-208ENST00000529563 C2orf83Q53S99 150 aa9.04□□□□□ -0.96
USH1C-208ENST00000529563 SPANXN5Q5MJ07 72 aa9.04□□□□□ -0.96
USH1C-208ENST00000529563 CEMP1Q6PRD7 247 aaPredicted RBP9.04□□□□□ -0.96
USH1C-208ENST00000529563 ZBTB8BQ8NAP8 495 aaPredicted RBP9.04□□□□□ -0.96
USH1C-208ENST00000529563 TMEM190Q8WZ59 177 aa9.04□□□□□ -0.96
USH1C-208ENST00000529563 C2orf50Q96LR7 162 aa9.04□□□□□ -0.96
USH1C-208ENST00000529563 ZNF436Q9C0F3 470 aaPredicted RBP9.04□□□□□ -0.96
USH1C-208ENST00000529563 PSENENQ9NZ42 101 aa9.04□□□□□ -0.96
USH1C-208ENST00000529563 LSM5Q9Y4Y9 91 aaKnown RBP9.04□□□□□ -0.96
USH1C-208ENST00000529563 IGHV3OR16-8A0A075B7F1 116 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 NDUFA4O00483 81 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 PITX3O75364 302 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 IGHV3-48P01763 117 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 SLC25A4P12235 298 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 BCAP31P51572 246 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 POLR2GP62487 172 aaKnown RBP eCLIP9.03□□□□□ -0.96
USH1C-208ENST00000529563 CYCSP99999 105 aaKnown RBP9.03□□□□□ -0.96
USH1C-208ENST00000529563 KLK9Q2XQG4 91 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 WFDC3Q8IUB2 231 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 SLC35E1Q96K37 410 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 OR10C1Q96KK4 312 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 RAB40CQ96S21 281 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 ATP6V0BQ99437 205 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 KLK9Q9UKQ9 250 aa9.03□□□□□ -0.96
USH1C-208ENST00000529563 TRAV30A0A087WSZ9 112 aa9.02□□□□□ -0.97
USH1C-208ENST00000529563 KIR2DL5BA0A0G2JN68 375 aa9.02□□□□□ -0.97
USH1C-208ENST00000529563 KIR2DL5BA0A0G2JPC4 375 aa9.02□□□□□ -0.97
USH1C-208ENST00000529563 MPTX1A8MV57 137 aa9.02□□□□□ -0.97
USH1C-208ENST00000529563 K7EIM0 57 aa9.02□□□□□ -0.97
USH1C-208ENST00000529563 TFPI2P48307 235 aa9.02□□□□□ -0.97
USH1C-208ENST00000529563 MFAP2P55001 183 aa9.02□□□□□ -0.97
USH1C-208ENST00000529563 KIR2DL5AQ8N109 375 aa9.02□□□□□ -0.97
USH1C-208ENST00000529563 KIR2DL5BQ8NHK3 375 aa9.02□□□□□ -0.97
USH1C-208ENST00000529563 ACY3Q96HD9 319 aa9.02□□□□□ -0.97
USH1C-208ENST00000529563 ALMS1Q8TCU4 4167 aa9.01□□□□□ -0.97
USH1C-208ENST00000529563 IGKV3-7A0A075B6H7 116 aa9.01□□□□□ -0.97
USH1C-208ENST00000529563 SMCO3A2RU48 225 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms