RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 CT83Q5H943 113 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 C10orf55Q5SWW7 151 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 GDF5OSQ5U4N7 250 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 ATP5L2Q7Z4Y8 100 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 TMEM116Q8NCL8 245 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 NUP35Q8NFH5 326 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 OR4B1Q8NGF8 309 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 TSKUQ8WUA8 353 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 PERPQ96FX8 193 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 RITA1Q96K30 269 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 LINC00479Q96M42 142 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 PRSS22Q9GZN4 317 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 TMEM133Q9H2Q1 129 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 SAP30LQ9HAJ7 183 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 TNFRSF19Q9NS68 423 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 SERTAD4Q9NUC0 356 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 ZNF492Q9P255 531 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 RNF114Q9Y508 228 aa6.72□□□□□ -1.33
CSTF3-208ENST00000528865 A0A1B0GXF2 115 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 SHISA9B4DS77 424 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 DIRC3C9JPN6 131 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 E7EQL1 145 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 CORTO00230 105 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 SPINK4O60575 86 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 TOMM40O96008 361 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 HIST1H1EP10412 219 aaKnown RBP6.71□□□□□ -1.34
CSTF3-208ENST00000528865 CA7P43166 264 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 MFAP2P55001 183 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 CASP6P55212 293 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 TCL1AP56279 114 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 MRPL54Q6P161 138 aaKnown RBP6.71□□□□□ -1.34
CSTF3-208ENST00000528865 ZNF841Q6ZN19 808 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 ZNF705AQ6ZN79 300 aaPredicted RBP6.71□□□□□ -1.34
CSTF3-208ENST00000528865 LINC00305Q7Z4B0 112 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 SPACA3Q8IXA5 215 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 C18orf32Q8TCD1 76 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 VN1R17PQ8TDU5 208 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 H1FXQ92522 213 aaKnown RBP6.71□□□□□ -1.34
CSTF3-208ENST00000528865 GPR82Q96P67 336 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 RBM14Q96PK6 669 aaKnown RBP6.71□□□□□ -1.34
CSTF3-208ENST00000528865 RNF5Q99942 180 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 SRSF8Q9BRL6 282 aaKnown RBP6.71□□□□□ -1.34
CSTF3-208ENST00000528865 VAMP8Q9BV40 100 aa6.71□□□□□ -1.34
CSTF3-208ENST00000528865 TBL2Q9Y4P3 447 aaKnown RBP6.71□□□□□ -1.34
CSTF3-208ENST00000528865 C19orf71A6NCJ1 209 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 PGPA6NDG6 321 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 SLC25A17O43808 307 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 HYPMO75409 117 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 IGLV1-47P01700 117 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 NBEAP1P0C6P0 100 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 RPL27AP46776 148 aaKnown RBP6.7□□□□□ -1.34
CSTF3-208ENST00000528865 AMTP48728 403 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 SLAQ13239 276 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 MMDQ15546 238 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 FAM162BQ5T6X4 162 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 RUSC1-AS1Q66K80 236 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 C16orf54Q6UWD8 224 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 C8orf46Q8TAG6 207 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 CCL17Q92583 94 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 RCHY1Q96PM5 261 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 ALKBH7Q9BT30 221 aaPredicted RBP6.7□□□□□ -1.34
CSTF3-208ENST00000528865 NGBQ9NPG2 151 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 TMEM14CQ9P0S9 112 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 SIGLEC9Q9Y336 463 aa6.7□□□□□ -1.34
CSTF3-208ENST00000528865 SOX21Q9Y651 276 aaPredicted RBP6.7□□□□□ -1.34
CSTF3-208ENST00000528865 YLPM1P49750 1951 aaKnown RBP6.69□□□□□ -1.34
CSTF3-208ENST00000528865 TRAV34A0A0B4J273 112 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 FAM231BA6NCW3 169 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 VWC2LB2RUY7 222 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 B9A039 149 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 LY6LH3BQJ8 138 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 KLK10O43240 276 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 MOSP00540 346 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 CA1P00915 261 aaPredicted RBP6.69□□□□□ -1.34
CSTF3-208ENST00000528865 LTAP01374 205 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 RBP4P02753 201 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 SLC25A5P05141 298 aaKnown RBP6.69□□□□□ -1.34
CSTF3-208ENST00000528865 C3orf79P0CE67 100 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 GP9P14770 177 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 APOBEC3AP31941 199 aaPredicted RBP6.69□□□□□ -1.34
CSTF3-208ENST00000528865 KRTDAPP60985 99 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 SLC35B1P78383 322 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 GAGE1Q13065 139 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 ZNF124Q15973 351 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 DMRTA1Q5VZB9 504 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 CYB5R2Q6BCY4 276 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 Q8NA96 180 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 C5orf17Q8NAS9 161 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 C22orf15Q8WYQ4 148 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 FMC1Q96HJ9 113 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 ATG101Q9BSB4 218 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 SSBP3Q9BWW4 388 aaPredicted RBP6.69□□□□□ -1.34
CSTF3-208ENST00000528865 GFRA4Q9GZZ7 299 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 OTORQ9NRC9 128 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 TPSG1Q9NRR2 321 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 C1RLQ9NZP8 487 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 RALYQ9UKM9 306 aaKnown RBP6.69□□□□□ -1.34
CSTF3-208ENST00000528865 PAM16Q9Y3D7 125 aa6.69□□□□□ -1.34
CSTF3-208ENST00000528865 F11RQ9Y624 299 aaKnown RBP6.69□□□□□ -1.34
CSTF3-208ENST00000528865 TNRC18O15417 2968 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms