RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 CD69Q07108 199 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 C18orf65Q6ZTR6 163 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 CCDC28AQ8IWP9 274 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 TMEM217Q8N7C4 229 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 VN1R17PQ8TDU5 208 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 A0A0G2JLM5 398 aa9.41□□□□□ -0.9
TRAF3IP2-211ENST00000528599 GPX4P36969 197 aaPredicted RBP9.41□□□□□ -0.9
TRAF3IP2-211ENST00000528599 RAB5CP51148 216 aa9.41□□□□□ -0.9
TRAF3IP2-211ENST00000528599 BLOC1S1P78537 153 aa9.41□□□□□ -0.9
TRAF3IP2-211ENST00000528599 ZNF266Q14584 549 aa9.41□□□□□ -0.9
TRAF3IP2-211ENST00000528599 SLC16A13Q7RTY0 426 aa9.41□□□□□ -0.9
TRAF3IP2-211ENST00000528599 STX12Q86Y82 276 aa9.41□□□□□ -0.9
TRAF3IP2-211ENST00000528599 OR10P1Q8NGE3 313 aa9.41□□□□□ -0.9
TRAF3IP2-211ENST00000528599 ZNF502Q8TBZ5 544 aa9.41□□□□□ -0.9
TRAF3IP2-211ENST00000528599 UBE2E2Q96LR5 201 aa9.41□□□□□ -0.9
TRAF3IP2-211ENST00000528599 OR5B12Q96R08 314 aa9.41□□□□□ -0.9
TRAF3IP2-211ENST00000528599 WFDC1Q9HC57 220 aa9.41□□□□□ -0.9
TRAF3IP2-211ENST00000528599 F8W735 103 aaPredicted RBP9.4□□□□□ -0.9
TRAF3IP2-211ENST00000528599 TEX46H3BTG2 121 aa9.4□□□□□ -0.9
TRAF3IP2-211ENST00000528599 SPP1P10451 314 aa9.4□□□□□ -0.9
TRAF3IP2-211ENST00000528599 CDX1P47902 265 aaPredicted RBP9.4□□□□□ -0.9
TRAF3IP2-211ENST00000528599 SLC38A11Q08AI6 406 aa9.4□□□□□ -0.9
TRAF3IP2-211ENST00000528599 GAMTQ14353 236 aa9.4□□□□□ -0.9
TRAF3IP2-211ENST00000528599 KHDC1LQ5JSQ8 128 aa9.4□□□□□ -0.9
TRAF3IP2-211ENST00000528599 IL34Q6ZMJ4 242 aa9.4□□□□□ -0.9
TRAF3IP2-211ENST00000528599 LYPD6BQ8NI32 183 aa9.4□□□□□ -0.9
TRAF3IP2-211ENST00000528599 CACNG8Q8WXS5 425 aa9.4□□□□□ -0.9
TRAF3IP2-211ENST00000528599 CCDC140Q96MF4 163 aa9.4□□□□□ -0.9
TRAF3IP2-211ENST00000528599 C21orf62Q9NYP8 219 aa9.4□□□□□ -0.9
TRAF3IP2-211ENST00000528599 ADARB2-AS1A8MUL3 147 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 RND2P52198 227 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 MFAP4P55083 255 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 ZNF343Q6P1L6 599 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 ACSM6Q6P461 480 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 C12orf54Q6X4T0 127 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 OR1S2Q8NGQ3 325 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 OR5C1Q8NGR4 320 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 EEF1AKMT3Q96AZ1 226 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 CITED1Q99966 193 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 TSSC4Q9Y5U2 329 aaPredicted RBP9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 TRBV7-1A0A0A6YYK4 115 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 A0A1W2PRX2 142 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 ZNF705EA8MWA4 302 aaPredicted RBP9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 TRBV12-3P01733 135 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 HBG1P69891 147 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 HBG2P69892 147 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 DLK1P80370 383 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 ETFRF1Q6IPR1 90 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 CLEC19AQ6UXS0 136 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 TMEM116Q8NCL8 245 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 NPIPB3Q92617 1050 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 ACY3Q96HD9 319 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 SMIM3Q9BZL3 60 aa9.39□□□□□ -0.91
TRAF3IP2-211ENST00000528599 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 DFFBO76075 338 aa9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 SCAF4O95104 1147 aaKnown RBP9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 CLEC3BP05452 202 aa9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 LGALS1P09382 135 aaKnown RBP9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 FCGR2BP31994 310 aaPredicted RBP9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 CLINT1Q14677 625 aa9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 BTNL8Q6UX41 500 aa9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 KLHL30-AS1Q8NEE0 82 aa9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 OR4X1Q8NH49 305 aa9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 C4orf3Q8WVX3 66 aa9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 SLC35E1Q96K37 410 aa9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 ZNF747Q9BV97 191 aa9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 GGACTQ9BVM4 153 aa9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 PLA2G2EQ9NZK7 142 aa9.38□□□□□ -0.91
TRAF3IP2-211ENST00000528599 IGKV1OR2-108A0A075B7D4 117 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 SMCO3A2RU48 225 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 OR2T8A6NH00 312 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 PPP5D1E7EU14 171 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 CLN5O75503 358 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 M6PRP20645 277 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 GPR183P32249 361 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 VWC2Q2TAL6 325 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 DEFB136Q30KP8 78 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 Q56UQ5 140 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 C8orf86Q6ZUL3 223 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 LILRB2Q8N423 598 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 GNPNAT1Q96EK6 184 aaPredicted RBP9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 LINC00052Q96N35 136 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 TXN2Q99757 166 aa9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 PEF1Q9UBV8 284 aaKnown RBP9.37□□□□□ -0.91
TRAF3IP2-211ENST00000528599 UMAD1C9J7I0 102 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 FNDC10F2Z333 226 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 GNG7O60262 68 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 CTSGP08311 255 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 ADMP35318 185 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 NPBWR1P48145 328 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 RUNX1Q01196 453 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 AKR1C1Q04828 323 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 ATP6V1FQ16864 119 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 NSUN5P1Q3KNT7 163 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 PXDC1Q5TGL8 231 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 TREML4Q6UXN2 200 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 NDUFA11Q86Y39 141 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 C3orf56Q8N813 242 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 CHRDL1Q9BU40 450 aa9.36□□□□□ -0.91
TRAF3IP2-211ENST00000528599 TMEM147Q9BVK8 224 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms