RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 ATG101Q9BSB4 218 aa8.27□□□□□ -1.09
CMTM1-211ENST00000528484 Q9H521 79 aa8.27□□□□□ -1.09
CMTM1-211ENST00000528484 FAM90A26D6RGX4 464 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 ANKRD65E5RJM6 399 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 H3BMM0 161 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 SLC25A4P12235 298 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 HLA-DRB4P13762 266 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 RCVRNP35243 200 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 ETV6P41212 452 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 HTR2BP41595 481 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 FAM3BP58499 235 aaPredicted RBP8.26□□□□□ -1.09
CMTM1-211ENST00000528484 SIGLEC15Q6ZMC9 328 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 ZNF705AQ6ZN79 300 aaPredicted RBP8.26□□□□□ -1.09
CMTM1-211ENST00000528484 GLMPQ8WWB7 406 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 ZNF486Q96H40 463 aaPredicted RBP8.26□□□□□ -1.09
CMTM1-211ENST00000528484 SCRT1Q9BWW7 348 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 GOLT1BQ9Y3E0 138 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 HLA-DRB4X5D2U9 266 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 DNAH5Q8TE73 4624 aa8.26□□□□□ -1.09
CMTM1-211ENST00000528484 A0A0B4J293 547 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 CDK2AP2O75956 126 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 IGKV1-17P01599 117 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 IL4P05112 153 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 OR10J1P30954 320 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 ID1P41134 155 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 NKX2-1P43699 371 aaPredicted RBP8.25□□□□□ -1.09
CMTM1-211ENST00000528484 IZUMO4Q1ZYL8 232 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 FAM222AQ5U5X8 452 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 ETFRF1Q6IPR1 90 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 LYSMD2Q8IV50 215 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 MAPKAPK5-AS1Q8N8E1 139 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 C15orf53Q8NAA6 179 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 COQ8AQ8NI60 647 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 C7orf50Q9BRJ6 194 aaKnown RBP8.25□□□□□ -1.09
CMTM1-211ENST00000528484 YTHDF1Q9BYJ9 559 aaKnown RBP8.25□□□□□ -1.09
CMTM1-211ENST00000528484 FNDC4Q9H6D8 234 aaPredicted RBP8.25□□□□□ -1.09
CMTM1-211ENST00000528484 SCPEP1Q9HB40 452 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 COPZ2Q9P299 210 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 DKK2Q9UBU2 259 aa8.25□□□□□ -1.09
CMTM1-211ENST00000528484 ZNF705FA8MVS1 300 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-211ENST00000528484 IGKV3-20P01619 116 aa8.24□□□□□ -1.09
CMTM1-211ENST00000528484 HBE1P02100 147 aa8.24□□□□□ -1.09
CMTM1-211ENST00000528484 ZNF705DP0CH99 300 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-211ENST00000528484 ZNF705BP0CI00 300 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-211ENST00000528484 RND2P52198 227 aa8.24□□□□□ -1.09
CMTM1-211ENST00000528484 PIGPP57054 158 aa8.24□□□□□ -1.09
CMTM1-211ENST00000528484 YPEL3P61236 119 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-211ENST00000528484 RND3P61587 244 aa8.24□□□□□ -1.09
CMTM1-211ENST00000528484 DAD1P61803 113 aa8.24□□□□□ -1.09
CMTM1-211ENST00000528484 DHODHQ02127 395 aa8.24□□□□□ -1.09
CMTM1-211ENST00000528484 OXA1LQ15070 435 aa8.24□□□□□ -1.09
CMTM1-211ENST00000528484 GSG1LQ6UXU4 331 aa8.24□□□□□ -1.09
CMTM1-211ENST00000528484 NOXA1Q86UR1 476 aa8.24□□□□□ -1.09
CMTM1-211ENST00000528484 CCDC71LQ8N9Z2 235 aa8.24□□□□□ -1.09
CMTM1-211ENST00000528484 RNASEH2CQ8TDP1 164 aaKnown RBP8.24□□□□□ -1.09
CMTM1-211ENST00000528484 HEYLQ9NQ87 328 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-211ENST00000528484 MRPL36Q9P0J6 103 aaKnown RBP8.24□□□□□ -1.09
CMTM1-211ENST00000528484 U3KQE9 123 aa8.24□□□□□ -1.09
CMTM1-211ENST00000528484 C3orf85A0A1B0GTC6 90 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 B3GALNT1O75752 331 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 IGKV1-5P01602 117 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 IGLC1P0CG04 106 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 RD3LP0DJH9 198 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 SPCS3P61009 180 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 NEDD8Q15843 81 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 MLANAQ16655 118 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 SPATA31B1PQ5VZV4 182 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 TMEM88Q6PEY1 159 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 FOXI2Q6ZQN5 318 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 SNX29P2Q8IUI4 249 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 OR4B1Q8NGF8 309 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 GPX8Q8TED1 209 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 LINC00052Q96N35 136 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 TMEM208Q9BTX3 173 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 KRTAP4-5Q9BYR2 181 aa8.23□□□□□ -1.09
CMTM1-211ENST00000528484 APOBP04114 4563 aaKnown RBP8.23□□□□□ -1.09
CMTM1-211ENST00000528484 LOC102723971A0A1B0GUV8 181 aa8.22□□□□□ -1.09
CMTM1-211ENST00000528484 BUB3O43684 328 aa8.22□□□□□ -1.09
CMTM1-211ENST00000528484 FXYD7P58549 80 aa8.22□□□□□ -1.09
CMTM1-211ENST00000528484 RRN3P1Q2M238 152 aa8.22□□□□□ -1.09
CMTM1-211ENST00000528484 RNASE10Q5GAN6 216 aaKnown RBP8.22□□□□□ -1.09
CMTM1-211ENST00000528484 SAMD13Q5VXD3 122 aa8.22□□□□□ -1.09
CMTM1-211ENST00000528484 EBLN2Q6P2I7 272 aa8.22□□□□□ -1.09
CMTM1-211ENST00000528484 PRSS54Q6PEW0 395 aa8.22□□□□□ -1.09
CMTM1-211ENST00000528484 FAM219AQ8IW50 185 aa8.22□□□□□ -1.09
CMTM1-211ENST00000528484 ZFAND1Q8TCF1 268 aa8.22□□□□□ -1.09
CMTM1-211ENST00000528484 TP53RKQ96S44 253 aa8.22□□□□□ -1.09
CMTM1-211ENST00000528484 MAGT1Q9H0U3 335 aa8.22□□□□□ -1.09
CMTM1-211ENST00000528484 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.22□□□□□ -1.09
CMTM1-211ENST00000528484 CACFD1Q9UGQ2 172 aa8.22□□□□□ -1.09
CMTM1-211ENST00000528484 CEBPZOSA8MTT3 80 aa8.21□□□□□ -1.1
CMTM1-211ENST00000528484 TOMM40O96008 361 aa8.21□□□□□ -1.1
CMTM1-211ENST00000528484 P0C879 139 aa8.21□□□□□ -1.1
CMTM1-211ENST00000528484 PI3P19957 117 aa8.21□□□□□ -1.1
CMTM1-211ENST00000528484 PSMB3P49720 205 aa8.21□□□□□ -1.1
CMTM1-211ENST00000528484 USF2Q15853 346 aaPredicted RBP8.21□□□□□ -1.1
CMTM1-211ENST00000528484 BSXQ3C1V8 233 aa8.21□□□□□ -1.1
CMTM1-211ENST00000528484 C2orf83Q53S99 150 aa8.21□□□□□ -1.1
CMTM1-211ENST00000528484 C6orf223Q8N319 242 aa8.21□□□□□ -1.1
CMTM1-211ENST00000528484 SLC24A4Q8NFF2 622 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms