RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 HRNRQ86YZ3 2850 aaPredicted RBP10.19□□□□□ -0.78
CAPN1-208ENST00000527323 KBTBD11-OT1A0A1B0GTJ5 212 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 A0A1W2PRE2 83 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 SMIM27A0A1W2PRY6 76 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 IGLV2-8P01709 118 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 HINT1P49773 126 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-208ENST00000527323 SLAQ13239 276 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 CR1LQ2VPA4 569 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 GFRALQ6UXV0 394 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 C19orf35Q6ZS72 473 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 RND1Q92730 232 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 SLC25A33Q9BSK2 321 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 FAM215AQ9Y5M1 114 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 UPK2O00526 184 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 IGKV1-16P04430 117 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 CAMPP49913 170 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 PRCDQ00LT1 54 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 FAM27E3Q08E93 113 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 RTL8BQ17RB0 113 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 DUX4L9Q6RFH8 374 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-208ENST00000527323 OR10W1Q8NGF6 305 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 ITLN1Q8WWA0 313 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 CLEC7AQ9BXN2 247 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 TEX50A0A1B0GTY4 177 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 C20orf202A1L168 122 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 MSMPQ1L6U9 139 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 Q56UQ5 140 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 SARAFQ96BY9 339 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 ZNRD1Q9P1U0 126 aa10.18□□□□□ -0.78
CAPN1-208ENST00000527323 AMMECR1Q9Y4X0 333 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-208ENST00000527323 SRRM4A7MD48 611 aaKnown RBP10.17□□□□□ -0.78
CAPN1-208ENST00000527323 FNDC10F2Z333 226 aa10.17□□□□□ -0.78
CAPN1-208ENST00000527323 M0R1B8 84 aa10.17□□□□□ -0.78
CAPN1-208ENST00000527323 M0R2Z0 102 aa10.17□□□□□ -0.78
CAPN1-208ENST00000527323 GPR6P46095 362 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-208ENST00000527323 PTTG1IPP53801 180 aa10.17□□□□□ -0.78
CAPN1-208ENST00000527323 TNXAQ16473 311 aa10.17□□□□□ -0.78
CAPN1-208ENST00000527323 RNASEKQ6P5S7 137 aaKnown RBP10.17□□□□□ -0.78
CAPN1-208ENST00000527323 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-208ENST00000527323 C1orf162Q8NEQ5 155 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-208ENST00000527323 OR2T6Q8NHC8 308 aa10.17□□□□□ -0.78
CAPN1-208ENST00000527323 C18orf32Q8TCD1 76 aa10.17□□□□□ -0.78
CAPN1-208ENST00000527323 C19orf24Q9BVV8 132 aa10.17□□□□□ -0.78
CAPN1-208ENST00000527323 IGHV3-48P01763 117 aa10.17□□□□□ -0.78
CAPN1-208ENST00000527323 SELENOVP59797 346 aa10.17□□□□□ -0.78
CAPN1-208ENST00000527323 PRR31Q5SQ13 230 aa10.17□□□□□ -0.78
CAPN1-208ENST00000527323 MORN5Q5VZ52 161 aa10.17□□□□□ -0.78
CAPN1-208ENST00000527323 BHLHA15Q7RTS1 189 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-208ENST00000527323 PYYP10082 97 aa10.16□□□□□ -0.78
CAPN1-208ENST00000527323 SSBP4Q9BWG4 385 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-208ENST00000527323 COMMD5Q9GZQ3 224 aa10.16□□□□□ -0.78
CAPN1-208ENST00000527323 PROCRQ9UNN8 238 aa10.16□□□□□ -0.78
CAPN1-208ENST00000527323 COX7A2P2O60397 106 aa10.16□□□□□ -0.78
CAPN1-208ENST00000527323 CGB3P0DN86 165 aa10.16□□□□□ -0.78
CAPN1-208ENST00000527323 CGB7P0DN87 165 aa10.16□□□□□ -0.78
CAPN1-208ENST00000527323 RPL8P62917 257 aaKnown RBP10.16□□□□□ -0.78
CAPN1-208ENST00000527323 SGK494Q96LW2 274 aa10.16□□□□□ -0.78
CAPN1-208ENST00000527323 IGF2BP2-AS1Q96M15 143 aa10.16□□□□□ -0.78
CAPN1-208ENST00000527323 CCL13Q99616 98 aa10.16□□□□□ -0.78
CAPN1-208ENST00000527323 MMP23AO75900 390 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 IGLV1-44P01699 117 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 IGHG3P01860 377 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 ERHP84090 104 aaKnown RBP10.15□□□□□ -0.78
CAPN1-208ENST00000527323 CD69Q07108 199 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 C2orf83Q53S99 150 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 ZNF257Q9Y2Q1 563 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 CELSR2Q9HCU4 2923 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 ITGB1BP1O14713 200 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 GOSR1O95249 250 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 CT45A6P0DMU7 189 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 CT45A5P0DMU8 189 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 CT45A7P0DMV0 189 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 RNASE2P10153 161 aaKnown RBP10.15□□□□□ -0.78
CAPN1-208ENST00000527323 PCP4P48539 62 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 KLF3P57682 345 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-208ENST00000527323 PMCHL1Q16048 86 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 Q6ZVH6 145 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 NUDT10Q8NFP7 164 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 NUDT11Q96G61 164 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 PAXXQ9BUH6 204 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 BET1LQ9NYM9 111 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 RPH3ALQ9UNE2 315 aa10.15□□□□□ -0.78
CAPN1-208ENST00000527323 REG1AP05451 166 aa10.15□□□□□ -0.79
CAPN1-208ENST00000527323 SAA1P0DJI8 122 aaPredicted RBP10.15□□□□□ -0.79
CAPN1-208ENST00000527323 CFHR2P36980 270 aa10.15□□□□□ -0.79
CAPN1-208ENST00000527323 ANKRD39Q53RE8 183 aa10.15□□□□□ -0.79
CAPN1-208ENST00000527323 NUP35Q8NFH5 326 aa10.15□□□□□ -0.79
CAPN1-208ENST00000527323 YLPM1P49750 1951 aaKnown RBP10.14□□□□□ -0.79
CAPN1-208ENST00000527323 NDUFB8O95169 186 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 PLAUP00749 431 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 TSPOP30536 169 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 SLC25A2Q9BXI2 301 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 MRPL32Q9BYC8 188 aaKnown RBP10.14□□□□□ -0.79
CAPN1-208ENST00000527323 PLSCR4Q9NRQ2 329 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 GUSBP1Q15486 140 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 POU2AF1Q16633 256 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 C10orf113Q5VZT2 155 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 UNQ5815/PRO19632Q6UWF5 114 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 FAM216BQ8N7L0 139 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 OR5B3Q8NH48 314 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms