RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 GCSAMLQ5JQS6 135 aa12.94□□□□□ -0.34
SNRNP35-204ENST00000527158 STPG3Q8N7X2 389 aa12.94□□□□□ -0.34
SNRNP35-204ENST00000527158 ZNF114Q8NC26 417 aa12.94□□□□□ -0.34
SNRNP35-204ENST00000527158 SRSF12Q8WXF0 261 aaKnown RBP12.94□□□□□ -0.34
SNRNP35-204ENST00000527158 PAX1P15863 534 aa12.93□□□□□ -0.34
SNRNP35-204ENST00000527158 ACTL10Q5JWF8 245 aa12.93□□□□□ -0.34
SNRNP35-204ENST00000527158 ETFRF1Q6IPR1 90 aa12.93□□□□□ -0.34
SNRNP35-204ENST00000527158 LINC00469Q8N7U9 141 aa12.93□□□□□ -0.34
SNRNP35-204ENST00000527158 NRGNQ92686 78 aa12.93□□□□□ -0.34
SNRNP35-204ENST00000527158 SRSF8Q9BRL6 282 aaKnown RBP12.93□□□□□ -0.34
SNRNP35-204ENST00000527158 GCGP01275 180 aa12.93□□□□□ -0.34
SNRNP35-204ENST00000527158 AREGP15514 252 aa12.93□□□□□ -0.34
SNRNP35-204ENST00000527158 PAX8Q06710 450 aa12.93□□□□□ -0.34
SNRNP35-204ENST00000527158 PDZD11Q5EBL8 140 aa12.93□□□□□ -0.34
SNRNP35-204ENST00000527158 SLC45A2Q9UMX9 530 aa12.93□□□□□ -0.34
SNRNP35-204ENST00000527158 TEX22C9J3V5 150 aa12.92□□□□□ -0.34
SNRNP35-204ENST00000527158 FAM106CPP0CH98 169 aa12.92□□□□□ -0.34
SNRNP35-204ENST00000527158 PRR20EP86478 221 aa12.92□□□□□ -0.34
SNRNP35-204ENST00000527158 PRR20CP86479 221 aa12.92□□□□□ -0.34
SNRNP35-204ENST00000527158 PRR20DP86480 221 aa12.92□□□□□ -0.34
SNRNP35-204ENST00000527158 PRR20BP86481 221 aa12.92□□□□□ -0.34
SNRNP35-204ENST00000527158 PRR20AP86496 221 aa12.92□□□□□ -0.34
SNRNP35-204ENST00000527158 OR2T6Q8NHC8 308 aa12.92□□□□□ -0.34
SNRNP35-204ENST00000527158 XKRY2A2RUG3 117 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 CORTO00230 105 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 NPFFO15130 113 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 CXorf1O96002 111 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 APELAP0DMC3 54 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 DEFA4P12838 97 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 OR10J1P30954 320 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 BRS3P32247 399 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 SAA4P35542 130 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 EBI3Q14213 229 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 C5orf64Q2M2E5 130 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 MISP3Q96FF7 219 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 TACC2O95359 2948 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 IGKV1OR2-108A0A075B7D4 117 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 A0A1W2PPQ1 181 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 NCBP2LA6PVI3 153 aaKnown RBP12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 MT-CO2P00403 227 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 TMEM11P17152 192 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 FOXL1Q12952 345 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 PVRIGQ6DKI7 326 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 NECAP1Q8NC96 275 aa12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 FNDC4Q9H6D8 234 aaPredicted RBP12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 F11RQ9Y624 299 aaKnown RBP12.91□□□□□ -0.34
SNRNP35-204ENST00000527158 UBR5O95071 2799 aaPredicted RBP12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 RHOBP62745 196 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 SSBP2P81877 361 aaPredicted RBP12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 FXYD3Q14802 87 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 C9orf152Q5JTZ5 239 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 LINC01551Q86U37 167 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 GATAD1Q8WUU5 269 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 TMEM18Q96B42 140 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 TRAV9-1A0A075B6T8 112 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 CENPVL3A0A0U1RRI6 287 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 LINC00869P0C866 280 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 STAG3L2P0CL84 134 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 STAG3L3P0CL85 134 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 REC114Q7Z4M0 266 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 Q8N6K4 173 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 C22orf15Q8WYQ4 148 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 NPIPB3Q92617 1050 aa12.9□□□□□ -0.34
SNRNP35-204ENST00000527158 AMBPP02760 352 aa12.89□□□□□ -0.35
SNRNP35-204ENST00000527158 LBHQ53QV2 105 aaPredicted RBP12.89□□□□□ -0.35
SNRNP35-204ENST00000527158 NOL4LQ96MY1 436 aaPredicted RBP12.89□□□□□ -0.35
SNRNP35-204ENST00000527158 C1RLQ9NZP8 487 aa12.89□□□□□ -0.35
SNRNP35-204ENST00000527158 ARL2-SNX15V9GYD0 113 aa12.89□□□□□ -0.35
SNRNP35-204ENST00000527158 SLC25A16P16260 332 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 DDTP30046 118 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 CLEC12BQ2HXU8 276 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 CST9LP1Q5W188 147 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 ZNF562Q6V9R5 426 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 AJUBAQ96IF1 538 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 C19orf24Q9BVV8 132 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 MDFIC2A0A1B0GVS7 189 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 IGHV3-48P01763 117 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 MSMBP08118 114 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 MFAP2P55001 183 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 FBLN7Q53RD9 439 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 LY96Q9Y6Y9 160 aa12.88□□□□□ -0.35
SNRNP35-204ENST00000527158 CRYGCP07315 174 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 NPPCP23582 126 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 SLC25A33Q9BSK2 321 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 ELOVL1Q9BW60 279 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 SEPSECSQ9HD40 501 aaKnown RBP12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 MED13LQ71F56 2210 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 WNK2Q9Y3S1 2297 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 GATA2P23769 480 aaPredicted RBP12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 CNN1P51911 297 aaKnown RBP12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 FAM78BQ5VT40 261 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 CDPF1Q6NVV7 123 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 C19orf35Q6ZS72 473 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 THAP8Q8NA92 274 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 OR1L6Q8NGR2 347 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 WNT10AQ9GZT5 417 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 FUT9Q9Y231 359 aa12.87□□□□□ -0.35
SNRNP35-204ENST00000527158 IGHV1-69DA0A0B4J2H0 117 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 TCRBV4S1A1TA0A5B7 111 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms