RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 TRBV7-1A0A0A6YYK4 115 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 TBX6O95947 436 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-213ENST00000526357 UBE2WQ96B02 151 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 TMEM242Q9NWH2 141 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 ZNF474Q6S9Z5 364 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-213ENST00000526357 RPRMLQ8N4K4 120 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 C9orf106Q8NAJ2 232 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 ZNF625Q96I27 306 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-213ENST00000526357 TIMM21Q9BVV7 248 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 DEPPQ9NTK1 212 aa7.81□□□□□ -1.16
CTNND1-213ENST00000526357 TRAV40A0A0B4J280 105 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 CELA3BP08861 270 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 RNF166Q96A37 237 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-213ENST00000526357 SOCS3O14543 225 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 TIAF1O95411 115 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 RPL35AP18077 110 aaKnown RBP7.8□□□□□ -1.16
CTNND1-213ENST00000526357 ZNF138P52744 262 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 UBE2CO00762 179 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 RAMP3O60896 148 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 GUSBP1Q15486 140 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 C9orf139Q6ZV77 190 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 SPANXDQ9BXN6 97 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 CTSBP07858 339 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 LYZL1Q6UWQ5 148 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 SIPA1L3O60292 1781 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-213ENST00000526357 CD24P25063 80 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 CHAC1Q9BUX1 264 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 CSTL1Q9H114 145 aa7.8□□□□□ -1.16
CTNND1-213ENST00000526357 HIST1H2BKO60814 126 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 IGHV3-53P01767 116 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 HIST1H2BJP06899 126 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 INAFM2P0DMQ5 153 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 HIST1H2BOP23527 126 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 HIST1H2BBP33778 126 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 HIST1H2BDP58876 126 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 HIST1H2BCP62807 126 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 HIST2H2BEQ16778 126 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-213ENST00000526357 VMO1Q7Z5L0 202 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 C11orf44Q8N8P7 122 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 HIST1H2BHQ93079 126 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 HIST1H2BNQ99877 126 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 HIST1H2BMQ99879 126 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 RNF5Q99942 180 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 RGPD4Q7Z3J3 1758 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 A0A1W2PR77 199 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 CD55P08174 381 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 DUTP33316 252 aaKnown RBP7.79□□□□□ -1.16
CTNND1-213ENST00000526357 WBP1Q96G27 269 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 IGKV1D-43A0A0B4J1Z2 117 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 LOC105371267A0A1B0GV96 52 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 NCR2O95944 276 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 LY6G5BQ8NDX9 201 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 RNF126Q9BV68 326 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 QSER1Q2KHR3 1735 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 OOSP1A8MZH6 123 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 SH2D1AO60880 128 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 ACTL10Q5JWF8 245 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 MINOS1Q5TGZ0 78 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 C1orf122Q6ZSJ8 110 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 ZNF114Q8NC26 417 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 C1orf159Q96HA4 380 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 MINOS1-NBL1R4GNA1 71 aa7.79□□□□□ -1.16
CTNND1-213ENST00000526357 IGKV1D-13A0A0B4J2D9 117 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 IGKV1-13P0DP09 117 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 SRSF7Q16629 238 aaKnown RBP eCLIP7.78□□□□□ -1.161e-6■■□□□ 13.9
CTNND1-213ENST00000526357 C15orf32Q32M92 178 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 PRIMA1Q86XR5 153 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 WDR83OSQ9Y284 106 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 A0A1B0GTI1 187 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 F8VVB4 439 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 F8VWA3 439 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 TIMP3P35625 211 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 PRB3Q04118 309 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-213ENST00000526357 C9orf153Q5TBE3 101 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 NEUROG3Q9Y4Z2 214 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 A6NNC1 897 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 MLNRO43193 412 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 EIF4EBP2Q13542 120 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-213ENST00000526357 NEGR1Q7Z3B1 354 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 TRGV9Q99603 122 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 SRRM4A7MD48 611 aaKnown RBP7.78□□□□□ -1.16
CTNND1-213ENST00000526357 CD5LO43866 347 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 TCRAP04437 139 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 PSG1P11464 419 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 LHX2P50458 406 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 RPL15P61313 204 aaKnown RBP7.78□□□□□ -1.16
CTNND1-213ENST00000526357 HEPN1Q6WQI6 88 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 IGHV2-26A0A0B4J1V2 119 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 FAM223BA6NKX1 122 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 PMS2P5A8MQ11 134 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 ZNF561-AS1K7EIQ3 104 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 SPINK8P0C7L1 97 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 FAM223AQ8IWN6 122 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 NKAPP1Q8N9T2 125 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 USMG5Q96IX5 58 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 HIST1H2BLQ99880 126 aa7.78□□□□□ -1.16
CTNND1-213ENST00000526357 A0A0G2JMM0 328 aa7.77□□□□□ -1.16
CTNND1-213ENST00000526357 A0A1W2PPB8 328 aa7.77□□□□□ -1.16
CTNND1-213ENST00000526357 KIR3DP1A8MWS1 328 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms