RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 BUB1B-PAK6H3BSN5 160 aa14.06□□□□□ -0.16
BEST1-203ENST00000524877 AMY1AP04745 511 aa14.06□□□□□ -0.16
BEST1-203ENST00000524877 SRSF7Q16629 238 aaKnown RBP eCLIP14.06□□□□□ -0.16
BEST1-203ENST00000524877 DEFB121Q5J5C9 76 aa14.06□□□□□ -0.16
BEST1-203ENST00000524877 CX3CL1P78423 397 aa14.06□□□□□ -0.16
BEST1-203ENST00000524877 TMEM95Q3KNT9 176 aa14.06□□□□□ -0.16
BEST1-203ENST00000524877 VOPP1Q96AW1 172 aa14.06□□□□□ -0.16
BEST1-203ENST00000524877 IGHV2-70DA0A0C4DH43 119 aa14.06□□□□□ -0.16
BEST1-203ENST00000524877 C7orf71A4D174 169 aa14.06□□□□□ -0.16
BEST1-203ENST00000524877 PRTN3P24158 256 aa14.06□□□□□ -0.16
BEST1-203ENST00000524877 MFAP2P55001 183 aa14.06□□□□□ -0.16
BEST1-203ENST00000524877 MRAP2Q96G30 205 aa14.06□□□□□ -0.16
BEST1-203ENST00000524877 RBFOX2O43251 390 aaKnown RBP eCLIP14.05□□□□□ -0.16
BEST1-203ENST00000524877 SRIP30626 198 aa14.05□□□□□ -0.16
BEST1-203ENST00000524877 TEX38Q6PEX7 206 aa14.05□□□□□ -0.16
BEST1-203ENST00000524877 LINC00305Q7Z4B0 112 aa14.05□□□□□ -0.16
BEST1-203ENST00000524877 SAA4P35542 130 aa14.05□□□□□ -0.16
BEST1-203ENST00000524877 NABP2Q9BQ15 211 aa14.05□□□□□ -0.16
BEST1-203ENST00000524877 UBE2E1P51965 193 aa14.05□□□□□ -0.16
BEST1-203ENST00000524877 IGHV1-69DA0A0B4J2H0 117 aa14.05□□□□□ -0.16
BEST1-203ENST00000524877 IGHV1-69P01742 117 aa14.05□□□□□ -0.16
BEST1-203ENST00000524877 SLC25A48Q6ZT89 311 aaKnown RBP14.05□□□□□ -0.16
BEST1-203ENST00000524877 IGKV1-12A0A0C4DH73 117 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 C15orf61A6NNL5 157 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 IGKV1D-12P01611 117 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 RPS20P60866 119 aaKnown RBP14.04□□□□□ -0.16
BEST1-203ENST00000524877 SPRY4Q9C004 299 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 SPINK8P0C7L1 97 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 UCP1P25874 307 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 CACNG8Q8WXS5 425 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 ST6GALNAC6Q969X2 333 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 IGKV1D-17A0A075B6S4 117 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 RUNX1Q01196 453 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 TWIST1Q15672 202 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 FAM159AQ6UWV7 190 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 ZNF502Q8TBZ5 544 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 TMEM42Q69YG0 159 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 FAM89BQ8N5H3 189 aa14.04□□□□□ -0.16
BEST1-203ENST00000524877 IGKV1-27A0A075B6S5 117 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 TRAV14DV4A0A0A6YYC5 116 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 IGLV1-44P01699 117 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 EFNB1P98172 346 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 RUSC1-AS1Q66K80 236 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 GATA4P43694 442 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 PRDM13Q9H4Q3 707 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 LINC00527Q9UJ94 153 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 NCOR1O75376 2440 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 ZNF324BQ6AW86 544 aaPredicted RBP14.03□□□□□ -0.16
BEST1-203ENST00000524877 PHLDA3Q9Y5J5 127 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 ADORA2A-AS1P86434 159 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 C1orf194Q5T5A4 169 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 GATAD1Q8WUU5 269 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 TXNDC17Q9BRA2 123 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 RPRMQ9NS64 109 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 TRAV8-4A0A0B4J246 113 aa14.03□□□□□ -0.16
BEST1-203ENST00000524877 A0A087WWC5 75 aa14.02□□□□□ -0.16
BEST1-203ENST00000524877 TTC9CQ8N5M4 171 aa14.02□□□□□ -0.16
BEST1-203ENST00000524877 DUX3Q96PT4 197 aa14.02□□□□□ -0.16
BEST1-203ENST00000524877 CST9LQ9H4G1 147 aa14.02□□□□□ -0.16
BEST1-203ENST00000524877 CACNA1BQ00975 2339 aa14.02□□□□□ -0.16
BEST1-203ENST00000524877 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.02□□□□□ -0.16
BEST1-203ENST00000524877 DUTP33316 252 aaKnown RBP14.02□□□□□ -0.16
BEST1-203ENST00000524877 PVRIGQ6DKI7 326 aa14.02□□□□□ -0.16
BEST1-203ENST00000524877 PSG1P11464 419 aa14.02□□□□□ -0.17
BEST1-203ENST00000524877 PLAURQ03405 335 aa14.02□□□□□ -0.17
BEST1-203ENST00000524877 KLHL30-AS1Q8NEE0 82 aa14.02□□□□□ -0.17
BEST1-203ENST00000524877 TMEM167AQ8TBQ9 72 aa14.02□□□□□ -0.17
BEST1-203ENST00000524877 RNF166Q96A37 237 aaPredicted RBP14.02□□□□□ -0.17
BEST1-203ENST00000524877 FAM90A9PA6NNJ1 464 aa14.02□□□□□ -0.17
BEST1-203ENST00000524877 CD55P08174 381 aa14.02□□□□□ -0.17
BEST1-203ENST00000524877 PAX8Q06710 450 aa14.02□□□□□ -0.17
BEST1-203ENST00000524877 GAGE1Q13065 139 aa14.02□□□□□ -0.17
BEST1-203ENST00000524877 HIST1H2BLQ99880 126 aa14.02□□□□□ -0.17
BEST1-203ENST00000524877 GAGE12BA1L429 117 aa14.01□□□□□ -0.17
BEST1-203ENST00000524877 PSPNO60542 156 aa14.01□□□□□ -0.17
BEST1-203ENST00000524877 LOC389332A0A1B0GUA5 103 aa14.01□□□□□ -0.17
BEST1-203ENST00000524877 NPIPB6E9PJ23 425 aa14.01□□□□□ -0.17
BEST1-203ENST00000524877 ANOS1P23352 680 aa14.01□□□□□ -0.17
BEST1-203ENST00000524877 GRNP28799 593 aaKnown RBP14.01□□□□□ -0.17
BEST1-203ENST00000524877 MEF2BQ02080 365 aaPredicted RBP14.01□□□□□ -0.17
BEST1-203ENST00000524877 HIST3H2BBQ8N257 126 aa14.01□□□□□ -0.17
BEST1-203ENST00000524877 LINC01587Q99440 93 aa14.01□□□□□ -0.17
BEST1-203ENST00000524877 TMEM238C9JI98 176 aa14□□□□□ -0.17
BEST1-203ENST00000524877 IL6RP08887 468 aaPredicted RBP14□□□□□ -0.17
BEST1-203ENST00000524877 SEC11AP67812 179 aa14□□□□□ -0.17
BEST1-203ENST00000524877 LEPP41159 167 aa14□□□□□ -0.17
BEST1-203ENST00000524877 FAM53AQ6NSI3 398 aaPredicted RBP14□□□□□ -0.17
BEST1-203ENST00000524877 TECTAO75443 2155 aa14□□□□□ -0.17
BEST1-203ENST00000524877 NR2C2APQ86WQ0 139 aa14□□□□□ -0.17
BEST1-203ENST00000524877 DUSP14O95147 198 aaKnown RBP14□□□□□ -0.17
BEST1-203ENST00000524877 GAGE13Q4V321 117 aa14□□□□□ -0.17
BEST1-203ENST00000524877 ZNF841Q6ZN19 808 aa14□□□□□ -0.17
BEST1-203ENST00000524877 EREGO14944 169 aa14□□□□□ -0.17
BEST1-203ENST00000524877 FOXI3A8MTJ6 420 aaPredicted RBP13.99□□□□□ -0.17
BEST1-203ENST00000524877 HIST1H2BKO60814 126 aa13.99□□□□□ -0.17
BEST1-203ENST00000524877 CD5P06127 495 aa13.99□□□□□ -0.17
BEST1-203ENST00000524877 HIST1H2BJP06899 126 aa13.99□□□□□ -0.17
BEST1-203ENST00000524877 HIST1H2BOP23527 126 aa13.99□□□□□ -0.17
BEST1-203ENST00000524877 MPZP25189 248 aa13.99□□□□□ -0.17
BEST1-203ENST00000524877 HIST1H2BBP33778 126 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms