RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, human

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-213	ENST00000524516	OR11H7	Q8NGC8	314 aa		5.21	□□□□□ -1.58
PUM1-213	ENST00000524516	OR52E5	Q8NH55	327 aa		5.21	□□□□□ -1.58
PUM1-213	ENST00000524516	ATP6V1G3	Q96LB4	118 aa		5.21	□□□□□ -1.58
PUM1-213	ENST00000524516	PGLYRP3	Q96LB9	341 aa		5.21	□□□□□ -1.58
PUM1-213	ENST00000524516	LPAR5	Q9H1C0	372 aa		5.21	□□□□□ -1.58
PUM1-213	ENST00000524516	ZNF446	Q9NWS9	450 aa		5.21	□□□□□ -1.58
PUM1-213	ENST00000524516	NSG2	Q9Y328	171 aa		5.21	□□□□□ -1.58
PUM1-213	ENST00000524516	OR2W1	Q9Y3N9	320 aa		5.21	□□□□□ -1.58
PUM1-213	ENST00000524516	IGKV1D-13	A0A0B4J2D9	117 aa		5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	IGHV3-38	A0A0C4DH36	116 aa		5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	SULT1C2	O00338	296 aa		5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	IGKV1-13	P0DP09	117 aa		5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	ZNF182	P17025	639 aa	Predicted RBP	5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	SRI	P30626	198 aa		5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	CCDC58	Q4VC31	144 aa		5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	REG3G	Q6UW15	175 aa		5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	CCDC28A	Q8IWP9	274 aa		5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	DEFB107A	Q8IZN7	70 aa		5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	GPR146	Q96CH1	333 aa		5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	SMIM19	Q96E16	107 aa		5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	CENPO	Q9BU64	300 aa		5.2	□□□□□ -1.58
PUM1-213	ENST00000524516	SNTN	A6NMZ2	147 aa		5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	BOLA2-SMG1P6	H3BVE0	249 aa		5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	RBFOX2	O43251	390 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	ZNF324	O75467	553 aa	Predicted RBP	5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	DUSP14	O95147	198 aa	Known RBP	5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	HLA-DQB1	P01920	261 aa		5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	CNN1	P51911	297 aa	Known RBP	5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	CATR1	Q13166	79 aa		5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	EIF4EBP1	Q13541	118 aa	Predicted RBP	5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	PRR4	Q16378	134 aa		5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	TIGIT	Q495A1	244 aa		5.19	□□□□□ -1.58
PUM1-213	ENST00000524516		Q6ZTI0	123 aa		5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	LGALS14	Q8TCE9	139 aa		5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	BAALC	Q8WXS3	180 aa		5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	KLK11	Q9UBX7	282 aa		5.19	□□□□□ -1.58
PUM1-213	ENST00000524516	TMEM235	A6NFC5	223 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516		A8MTW9	85 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	ISLR	O14498	428 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	BUB3	O43684	328 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	CLN5	O75503	358 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	IL4	P05112	153 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	GATA2	P23769	480 aa	Predicted RBP	5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	PRDX6	P30041	224 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	TMEM50B	P56557	158 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	GAMT	Q14353	236 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	ZFP41	Q8N8Y5	198 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516		Q8N976	141 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	BPIFB6	Q8NFQ5	453 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516		Q8WTZ3	238 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	CANT1	Q8WVQ1	401 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	PCNP	Q8WW12	178 aa	Known RBP	5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	PLEKHA2	Q9HB19	425 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	PPP1R14D	Q9NXH3	145 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	FKBP11	Q9NYL4	201 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	COMMD9	Q9P000	198 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	TAGLN3	Q9UI15	199 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	PRO0255	Q9UI72	69 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	PRND	Q9UKY0	176 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516	OAZ3	Q9UMX2	235 aa		5.18	□□□□□ -1.58
PUM1-213	ENST00000524516		H7BYZ3	331 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	PRAF2	O60831	178 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	IGHV3-30	P01768	117 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	IGHV3-33	P01772	117 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	IGHV3-30-3	P0DP02	117 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	IGHV3-30-5	P0DP03	117 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	POLR2I	P36954	125 aa	Known RBP	5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	TALDO1	P37837	337 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	OPRK1	P41145	380 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	CLDN12	P56749	244 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	QRFP	P83859	136 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	ERH	P84090	104 aa	Known RBP	5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	LINC01556	Q5JQF7	62 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	PLAC9	Q5JTB6	97 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	HES5	Q5TA89	166 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	MEDAG	Q5VYS4	303 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	FAM89B	Q8N5H3	189 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	OR51H1	Q8NH63	302 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	C16orf92	Q96LL3	132 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516	DERL3	Q96Q80	235 aa		5.17	□□□□□ -1.58
PUM1-213	ENST00000524516		A0A075B6Q4	140 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	TRAV30	A0A087WSZ9	112 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	FOXI3	A8MTJ6	420 aa	Predicted RBP	5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	HMGB1P1	B2RPK0	211 aa	Predicted RBP	5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	SOCS3	O14543	225 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	IGKV1-17	P01599	117 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	IGHV3-53	P01767	116 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	NUP62	P37198	522 aa	Predicted RBP	5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	RPS11	P62280	158 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	RHOB	P62745	196 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	FLOT2	Q14254	428 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	RAB11B	Q15907	218 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	SPART	Q8N0X7	666 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	THAP8	Q8NA92	274 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	OR56B1	Q8NGI3	324 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	OR6F1	Q8NGZ6	308 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	OR4X1	Q8NH49	305 aa		5.16	□□□□□ -1.58
PUM1-213	ENST00000524516	SECTM1	Q8WVN6	248 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms