RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ATG12O94817 140 aa18.55■□□□□ 0.56
PVT1-219ENST00000523427 RND2P52198 227 aa18.55■□□□□ 0.56
PVT1-219ENST00000523427 AP2S1P53680 142 aaPredicted RBP18.55■□□□□ 0.56
PVT1-219ENST00000523427 SNRPD3P62318 126 aaKnown RBP18.55■□□□□ 0.56
PVT1-219ENST00000523427 DHODHQ02127 395 aa18.55■□□□□ 0.56
PVT1-219ENST00000523427 RRNAD1Q96FB5 475 aaKnown RBP18.55■□□□□ 0.56
PVT1-219ENST00000523427 SCPEP1Q9HB40 452 aa18.55■□□□□ 0.56
PVT1-219ENST00000523427 PKD1P98161 4303 aa18.55■□□□□ 0.56
PVT1-219ENST00000523427 H3BMM0 161 aa18.54■□□□□ 0.56
PVT1-219ENST00000523427 SPART-AS1P0CW21 52 aa18.54■□□□□ 0.56
PVT1-219ENST00000523427 HTN3P15516 51 aa18.54■□□□□ 0.56
PVT1-219ENST00000523427 RPL5P46777 297 aaKnown RBP18.54■□□□□ 0.56
PVT1-219ENST00000523427 PLA2G2EQ9NZK7 142 aa18.54■□□□□ 0.56
PVT1-219ENST00000523427 RPS10-NUDT3A0A1W2PQS6 291 aa18.53■□□□□ 0.56
PVT1-219ENST00000523427 IGLC1P0CG04 106 aa18.53■□□□□ 0.56
PVT1-219ENST00000523427 DEFB1P60022 68 aa18.53■□□□□ 0.56
PVT1-219ENST00000523427 RND3P61587 244 aa18.53■□□□□ 0.56
PVT1-219ENST00000523427 OR1S2Q8NGQ3 325 aa18.53■□□□□ 0.56
PVT1-219ENST00000523427 IL4P05112 153 aa18.52■□□□□ 0.56
PVT1-219ENST00000523427 OR10J1P30954 320 aa18.52■□□□□ 0.56
PVT1-219ENST00000523427 USF2Q15853 346 aaPredicted RBP18.52■□□□□ 0.56
PVT1-219ENST00000523427 PRSS54Q6PEW0 395 aa18.52■□□□□ 0.56
PVT1-219ENST00000523427 HEYLQ9NQ87 328 aaPredicted RBP18.52■□□□□ 0.56
PVT1-219ENST00000523427 COPZ2Q9P299 210 aa18.52■□□□□ 0.56
PVT1-219ENST00000523427 Q6ZRM9 215 aa18.51■□□□□ 0.55
PVT1-219ENST00000523427 ZNF486Q96H40 463 aaPredicted RBP18.51■□□□□ 0.55
PVT1-219ENST00000523427 NRN1Q9NPD7 142 aa18.51■□□□□ 0.55
PVT1-219ENST00000523427 APOA1P02647 267 aa18.5■□□□□ 0.55
PVT1-219ENST00000523427 BSXQ3C1V8 233 aa18.5■□□□□ 0.55
PVT1-219ENST00000523427 RNASE10Q5GAN6 216 aaKnown RBP18.5■□□□□ 0.55
PVT1-219ENST00000523427 SIGLEC15Q6ZMC9 328 aa18.5■□□□□ 0.55
PVT1-219ENST00000523427 ELK1P19419 428 aa18.49■□□□□ 0.55
PVT1-219ENST00000523427 HTR2BP41595 481 aa18.49■□□□□ 0.55
PVT1-219ENST00000523427 SPCS3P61009 180 aa18.49■□□□□ 0.55
PVT1-219ENST00000523427 SOHLH1Q5JUK2 328 aa18.49■□□□□ 0.55
PVT1-219ENST00000523427 GDF5OSQ5U4N7 250 aa18.49■□□□□ 0.55
PVT1-219ENST00000523427 ZNF705AQ6ZN79 300 aaPredicted RBP18.49■□□□□ 0.55
PVT1-219ENST00000523427 LINC00052Q96N35 136 aa18.49■□□□□ 0.55
PVT1-219ENST00000523427 KLK11Q9UBX7 282 aa18.49■□□□□ 0.55
PVT1-219ENST00000523427 HPGDSO60760 199 aa18.48■□□□□ 0.55
PVT1-219ENST00000523427 ATP6V1G2O95670 118 aa18.48■□□□□ 0.55
PVT1-219ENST00000523427 CD74P04233 296 aa18.48■□□□□ 0.55
PVT1-219ENST00000523427 HLA-DRB4P13762 266 aa18.48■□□□□ 0.55
PVT1-219ENST00000523427 YPEL3P61236 119 aaPredicted RBP18.48■□□□□ 0.55
PVT1-219ENST00000523427 Q6ZR54 194 aa18.48■□□□□ 0.55
PVT1-219ENST00000523427 LHFPL1Q86WI0 220 aa18.48■□□□□ 0.55
PVT1-219ENST00000523427 YIPF6Q96EC8 236 aa18.48■□□□□ 0.55
PVT1-219ENST00000523427 ACY3Q96HD9 319 aa18.48■□□□□ 0.55
PVT1-219ENST00000523427 HLA-DRB4X5D2U9 266 aa18.48■□□□□ 0.55
PVT1-219ENST00000523427 NXPH3O95157 252 aa18.47■□□□□ 0.55
PVT1-219ENST00000523427 CD3DP04234 171 aa18.47■□□□□ 0.55
PVT1-219ENST00000523427 FAM222AQ5U5X8 452 aa18.47■□□□□ 0.55
PVT1-219ENST00000523427 GSG1LQ6UXU4 331 aa18.47■□□□□ 0.55
PVT1-219ENST00000523427 CCDC71LQ8N9Z2 235 aa18.47■□□□□ 0.55
PVT1-219ENST00000523427 NPIPB3Q92617 1050 aa18.47■□□□□ 0.55
PVT1-219ENST00000523427 TMEM189A5PLL7 270 aa18.46■□□□□ 0.55
PVT1-219ENST00000523427 CEBPZOSA8MTT3 80 aa18.46■□□□□ 0.55
PVT1-219ENST00000523427 ZNF705FA8MVS1 300 aaPredicted RBP18.46■□□□□ 0.55
PVT1-219ENST00000523427 BUB3O43684 328 aa18.46■□□□□ 0.55
PVT1-219ENST00000523427 ZNF705DP0CH99 300 aaPredicted RBP18.46■□□□□ 0.55
PVT1-219ENST00000523427 ZNF705BP0CI00 300 aaPredicted RBP18.46■□□□□ 0.55
PVT1-219ENST00000523427 RD3LP0DJH9 198 aa18.46■□□□□ 0.55
PVT1-219ENST00000523427 SLC25A4P12235 298 aa18.46■□□□□ 0.55
PVT1-219ENST00000523427 SCGB2B2Q4G0G5 96 aa18.46■□□□□ 0.55
PVT1-219ENST00000523427 OR4B1Q8NGF8 309 aa18.46■□□□□ 0.55
PVT1-219ENST00000523427 NEU1Q99519 415 aa18.46■□□□□ 0.55
PVT1-219ENST00000523427 NIPSNAP3BQ9BS92 247 aa18.46■□□□□ 0.55
PVT1-219ENST00000523427 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.46■□□□□ 0.55
PVT1-219ENST00000523427 RFNGQ9Y644 331 aa18.46■□□□□ 0.55
PVT1-219ENST00000523427 FAM25AB3EWG3 89 aa18.45■□□□□ 0.54
PVT1-219ENST00000523427 FAM25CB3EWG5 89 aa18.45■□□□□ 0.54
PVT1-219ENST00000523427 FAM25GB3EWG6 89 aa18.45■□□□□ 0.54
PVT1-219ENST00000523427 UCP1P25874 307 aa18.45■□□□□ 0.54
PVT1-219ENST00000523427 C1orf134Q5TEV5 83 aa18.45■□□□□ 0.54
PVT1-219ENST00000523427 SLC24A4Q8NFF2 622 aa18.45■□□□□ 0.54
PVT1-219ENST00000523427 OR51G1Q8NGK1 321 aa18.45■□□□□ 0.54
PVT1-219ENST00000523427 OR13C8Q8NGS7 320 aa18.45■□□□□ 0.54
PVT1-219ENST00000523427 ZFAND1Q8TCF1 268 aa18.45■□□□□ 0.54
PVT1-219ENST00000523427 PBDC1Q9BVG4 233 aa18.45■□□□□ 0.54
PVT1-219ENST00000523427 DKK2Q9UBU2 259 aa18.45■□□□□ 0.54
PVT1-219ENST00000523427 SMIM9A6NGZ8 99 aa18.44■□□□□ 0.54
PVT1-219ENST00000523427 NKX2-1P43699 371 aaPredicted RBP18.44■□□□□ 0.54
PVT1-219ENST00000523427 NCS1P62166 190 aa18.44■□□□□ 0.54
PVT1-219ENST00000523427 C2orf83Q53S99 150 aa18.44■□□□□ 0.54
PVT1-219ENST00000523427 ARRDC1Q8N5I2 433 aa18.44■□□□□ 0.54
PVT1-219ENST00000523427 OR4D10Q8NGI6 311 aa18.44■□□□□ 0.54
PVT1-219ENST00000523427 OR52I2Q8NH67 350 aa18.44■□□□□ 0.54
PVT1-219ENST00000523427 RNASEH2CQ8TDP1 164 aaKnown RBP18.44■□□□□ 0.54
PVT1-219ENST00000523427 SEPSECSQ9HD40 501 aaKnown RBP18.44■□□□□ 0.54
PVT1-219ENST00000523427 CACNG5Q9UF02 275 aa18.44■□□□□ 0.54
PVT1-219ENST00000523427 GSTZ1O43708 216 aaPredicted RBP18.43■□□□□ 0.54
PVT1-219ENST00000523427 TOMM40O96008 361 aa18.43■□□□□ 0.54
PVT1-219ENST00000523427 OR5AC1P0C628 307 aa18.43■□□□□ 0.54
PVT1-219ENST00000523427 PSG1P11464 419 aa18.43■□□□□ 0.54
PVT1-219ENST00000523427 MARCH1Q8TCQ1 289 aa18.43■□□□□ 0.54
PVT1-219ENST00000523427 FAM210BQ96KR6 192 aa18.43■□□□□ 0.54
PVT1-219ENST00000523427 MEF2DQ14814 521 aa18.42■□□□□ 0.54
PVT1-219ENST00000523427 OR52E5Q8NH55 327 aa18.42■□□□□ 0.54
PVT1-219ENST00000523427 TMEM170AQ8WVE7 144 aa18.42■□□□□ 0.54
PVT1-219ENST00000523427 C7orf50Q9BRJ6 194 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms