RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 SNRPD3P62318 126 aaKnown RBP16.19■□□□□ 0.18
PVT1-218ENST00000523328 SCPEP1Q9HB40 452 aa16.19■□□□□ 0.18
PVT1-218ENST00000523328 A0A0G2JRQ6 117 aa16.18■□□□□ 0.18
PVT1-218ENST00000523328 TMEM189A5PLL7 270 aa16.18■□□□□ 0.18
PVT1-218ENST00000523328 HLA-DRB4P13762 266 aa16.18■□□□□ 0.18
PVT1-218ENST00000523328 RCVRNP35243 200 aa16.18■□□□□ 0.18
PVT1-218ENST00000523328 EMP1P54849 157 aa16.18■□□□□ 0.18
PVT1-218ENST00000523328 PIGPP57054 158 aa16.18■□□□□ 0.18
PVT1-218ENST00000523328 YPEL3P61236 119 aaPredicted RBP16.18■□□□□ 0.18
PVT1-218ENST00000523328 USF2Q15853 346 aaPredicted RBP16.18■□□□□ 0.18
PVT1-218ENST00000523328 OR1S2Q8NGQ3 325 aa16.18■□□□□ 0.18
PVT1-218ENST00000523328 ZNF486Q96H40 463 aaPredicted RBP16.18■□□□□ 0.18
PVT1-218ENST00000523328 ENY2Q9NPA8 101 aa16.18■□□□□ 0.18
PVT1-218ENST00000523328 NRN1Q9NPD7 142 aa16.18■□□□□ 0.18
PVT1-218ENST00000523328 HLA-DRB4X5D2U9 266 aa16.18■□□□□ 0.18
PVT1-218ENST00000523328 M0QYG6 137 aa16.17■□□□□ 0.18
PVT1-218ENST00000523328 PGAM2P15259 253 aa16.17■□□□□ 0.18
PVT1-218ENST00000523328 DHODHQ02127 395 aa16.17■□□□□ 0.18
PVT1-218ENST00000523328 RNF212Q495C1 297 aa16.17■□□□□ 0.18
PVT1-218ENST00000523328 SOHLH1Q5JUK2 328 aa16.17■□□□□ 0.18
PVT1-218ENST00000523328 PRSS54Q6PEW0 395 aa16.17■□□□□ 0.18
PVT1-218ENST00000523328 Q8WTZ3 238 aa16.17■□□□□ 0.18
PVT1-218ENST00000523328 DKK2Q9UBU2 259 aa16.17■□□□□ 0.18
PVT1-218ENST00000523328 C3orf85A0A1B0GTC6 90 aa16.16■□□□□ 0.18
PVT1-218ENST00000523328 SMIM9A6NGZ8 99 aa16.16■□□□□ 0.18
PVT1-218ENST00000523328 BUB3O43684 328 aa16.16■□□□□ 0.18
PVT1-218ENST00000523328 ATG12O94817 140 aa16.16■□□□□ 0.18
PVT1-218ENST00000523328 RND2P52198 227 aa16.16■□□□□ 0.18
PVT1-218ENST00000523328 C1orf134Q5TEV5 83 aa16.16■□□□□ 0.18
PVT1-218ENST00000523328 GDF5OSQ5U4N7 250 aa16.16■□□□□ 0.18
PVT1-218ENST00000523328 LHFPL1Q86WI0 220 aa16.16■□□□□ 0.18
PVT1-218ENST00000523328 SNX29P2Q8IUI4 249 aa16.16■□□□□ 0.18
PVT1-218ENST00000523328 LRP1BQ9NZR2 4599 aa16.16■□□□□ 0.18
PVT1-218ENST00000523328 RPS10-NUDT3A0A1W2PQS6 291 aa16.15■□□□□ 0.18
PVT1-218ENST00000523328 IL4P05112 153 aa16.15■□□□□ 0.18
PVT1-218ENST00000523328 OR10J1P30954 320 aa16.15■□□□□ 0.18
PVT1-218ENST00000523328 NKX2-1P43699 371 aaPredicted RBP16.15■□□□□ 0.18
PVT1-218ENST00000523328 AARDQ4LEZ3 155 aa16.15■□□□□ 0.18
PVT1-218ENST00000523328 SIGLEC15Q6ZMC9 328 aa16.15■□□□□ 0.18
PVT1-218ENST00000523328 PLA2G2EQ9NZK7 142 aa16.15■□□□□ 0.18
PVT1-218ENST00000523328 HTR2BP41595 481 aa16.14■□□□□ 0.17
PVT1-218ENST00000523328 DEFB1P60022 68 aa16.14■□□□□ 0.17
PVT1-218ENST00000523328 SP6Q3SY56 376 aa16.14■□□□□ 0.17
PVT1-218ENST00000523328 FAM222AQ5U5X8 452 aa16.14■□□□□ 0.17
PVT1-218ENST00000523328 NIPSNAP3BQ9BS92 247 aa16.14■□□□□ 0.17
PVT1-218ENST00000523328 Q9H521 79 aa16.14■□□□□ 0.17
PVT1-218ENST00000523328 RFNGQ9Y644 331 aa16.14■□□□□ 0.17
PVT1-218ENST00000523328 IGHV3OR16-12A0A075B7B8 117 aa16.13■□□□□ 0.17
PVT1-218ENST00000523328 SLC25A4P12235 298 aa16.13■□□□□ 0.17
PVT1-218ENST00000523328 UCP1P25874 307 aa16.13■□□□□ 0.17
PVT1-218ENST00000523328 FXYD7P58549 80 aa16.13■□□□□ 0.17
PVT1-218ENST00000523328 SPCS3P61009 180 aa16.13■□□□□ 0.17
PVT1-218ENST00000523328 TRIM16LQ309B1 348 aa16.13■□□□□ 0.17
PVT1-218ENST00000523328 C2orf83Q53S99 150 aa16.13■□□□□ 0.17
PVT1-218ENST00000523328 RRNAD1Q96FB5 475 aaKnown RBP16.13■□□□□ 0.17
PVT1-218ENST00000523328 TEX48A0A1B0GUV7 120 aa16.12■□□□□ 0.17
PVT1-218ENST00000523328 SMIM31A0A1B0GVY4 71 aa16.12■□□□□ 0.17
PVT1-218ENST00000523328 NXPH3O95157 252 aa16.12■□□□□ 0.17
PVT1-218ENST00000523328 APOA1P02647 267 aa16.12■□□□□ 0.17
PVT1-218ENST00000523328 LSM3P62310 102 aaKnown RBP16.12■□□□□ 0.17
PVT1-218ENST00000523328 ZNF709Q8N972 641 aa16.12■□□□□ 0.17
PVT1-218ENST00000523328 OR52E5Q8NH55 327 aa16.12■□□□□ 0.17
PVT1-218ENST00000523328 COMMD3Q9UBI1 195 aa16.12■□□□□ 0.17
PVT1-218ENST00000523328 IGKV3-20P01619 116 aa16.11■□□□□ 0.17
PVT1-218ENST00000523328 OXA1LQ15070 435 aa16.11■□□□□ 0.17
PVT1-218ENST00000523328 RNASEH2CQ8TDP1 164 aaKnown RBP16.11■□□□□ 0.17
PVT1-218ENST00000523328 TMEM170AQ8WVE7 144 aa16.11■□□□□ 0.17
PVT1-218ENST00000523328 GSTZ1O43708 216 aaPredicted RBP16.1■□□□□ 0.17
PVT1-218ENST00000523328 CDK2AP2O75956 126 aa16.1■□□□□ 0.17
PVT1-218ENST00000523328 TOMM40O96008 361 aa16.1■□□□□ 0.17
PVT1-218ENST00000523328 HTN3P15516 51 aa16.1■□□□□ 0.17
PVT1-218ENST00000523328 ARRDC1Q8N5I2 433 aa16.1■□□□□ 0.17
PVT1-218ENST00000523328 YIPF6Q96EC8 236 aa16.1■□□□□ 0.17
PVT1-218ENST00000523328 CLUHP3Q96NS8 147 aa16.1■□□□□ 0.17
PVT1-218ENST00000523328 SAV1Q9H4B6 383 aaPredicted RBP16.1■□□□□ 0.17
PVT1-218ENST00000523328 HEYLQ9NQ87 328 aaPredicted RBP16.1■□□□□ 0.17
PVT1-218ENST00000523328 COPZ2Q9P299 210 aa16.1■□□□□ 0.17
PVT1-218ENST00000523328 TNP2Q05952 138 aa16.09■□□□□ 0.17
PVT1-218ENST00000523328 RNASE10Q5GAN6 216 aaKnown RBP16.09■□□□□ 0.17
PVT1-218ENST00000523328 TMEM88Q6PEY1 159 aa16.09■□□□□ 0.17
PVT1-218ENST00000523328 SLC24A4Q8NFF2 622 aa16.09■□□□□ 0.17
PVT1-218ENST00000523328 RNASE11Q8TAA1 199 aaKnown RBP16.09■□□□□ 0.17
PVT1-218ENST00000523328 NPIPB3Q92617 1050 aa16.09■□□□□ 0.17
PVT1-218ENST00000523328 WDR12Q9GZL7 423 aaKnown RBP16.09■□□□□ 0.17
PVT1-218ENST00000523328 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.09■□□□□ 0.17
PVT1-218ENST00000523328 KLK11Q9UBX7 282 aa16.09■□□□□ 0.17
PVT1-218ENST00000523328 C16orf90A8MZG2 172 aa16.08■□□□□ 0.16
PVT1-218ENST00000523328 CD3DP04234 171 aa16.08■□□□□ 0.16
PVT1-218ENST00000523328 RD3LP0DJH9 198 aa16.08■□□□□ 0.16
PVT1-218ENST00000523328 ELK1P19419 428 aa16.08■□□□□ 0.16
PVT1-218ENST00000523328 FOXI2Q6ZQN5 318 aa16.08■□□□□ 0.16
PVT1-218ENST00000523328 FAM219AQ8IW50 185 aa16.08■□□□□ 0.16
PVT1-218ENST00000523328 SLC35B3Q9H1N7 401 aa16.08■□□□□ 0.16
PVT1-218ENST00000523328 YTHDF2Q9Y5A9 579 aaKnown RBP16.08■□□□□ 0.16
PVT1-218ENST00000523328 CDS2O95674 445 aa16.07■□□□□ 0.16
PVT1-218ENST00000523328 PSG1P11464 419 aa16.07■□□□□ 0.16
PVT1-218ENST00000523328 RNASE12Q5GAN4 147 aaKnown RBP16.07■□□□□ 0.16
PVT1-218ENST00000523328 C1orf158Q8N1D5 194 aa16.07■□□□□ 0.16
PVT1-218ENST00000523328 CCDC71LQ8N9Z2 235 aa16.07■□□□□ 0.16
PVT1-218ENST00000523328 OR51G1Q8NGK1 321 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms