RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 B4DSR2 109 aa13.44□□□□□ -0.26
USP42-207ENST00000521713 GPX1P07203 203 aa13.44□□□□□ -0.26
USP42-207ENST00000521713 ORMDL3Q8N138 153 aa13.44□□□□□ -0.26
USP42-207ENST00000521713 TANC1Q9C0D5 1861 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 UPK2O00526 184 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 DNAL4O96015 105 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 NBEAP1P0C6P0 100 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 ID3Q02535 119 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 SRSF4Q08170 494 aaKnown RBP13.43□□□□□ -0.26
USP42-207ENST00000521713 PAQR4Q8N4S7 273 aaPredicted RBP13.43□□□□□ -0.26
USP42-207ENST00000521713 SSC4DQ8WTU2 575 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 ST6GALNAC6Q969X2 333 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 KLHDC3Q9BQ90 382 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 TMEM178BH3BS89 294 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 TYMSP04818 313 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 TFF3Q07654 80 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 CYTL1Q9NRR1 136 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 DOPEY2Q9Y3R5 2298 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 MUC6Q6W4X9 2439 aa13.43□□□□□ -0.26
USP42-207ENST00000521713 SAA1P0DJI8 122 aaPredicted RBP13.42□□□□□ -0.26
USP42-207ENST00000521713 PRSS8Q16651 343 aa13.42□□□□□ -0.26
USP42-207ENST00000521713 ZNF474Q6S9Z5 364 aaPredicted RBP13.42□□□□□ -0.26
USP42-207ENST00000521713 LINC00305Q7Z4B0 112 aa13.42□□□□□ -0.26
USP42-207ENST00000521713 TEX45Q8NA69 505 aa13.42□□□□□ -0.26
USP42-207ENST00000521713 OR9G4Q8NGQ1 327 aa13.42□□□□□ -0.26
USP42-207ENST00000521713 GPR82Q96P67 336 aa13.42□□□□□ -0.26
USP42-207ENST00000521713 RPUSD1Q9UJJ7 312 aaKnown RBP13.42□□□□□ -0.26
USP42-207ENST00000521713 ATP5L2Q7Z4Y8 100 aa13.42□□□□□ -0.26
USP42-207ENST00000521713 CXCL1P09341 107 aa13.42□□□□□ -0.26
USP42-207ENST00000521713 NUDT10Q8NFP7 164 aa13.42□□□□□ -0.26
USP42-207ENST00000521713 FOXA2Q9Y261 457 aaPredicted RBP13.42□□□□□ -0.26
USP42-207ENST00000521713 TMEM50AO95807 157 aa13.42□□□□□ -0.26
USP42-207ENST00000521713 Q5PR19 223 aa13.42□□□□□ -0.26
USP42-207ENST00000521713 ANAPC13Q9BS18 74 aa13.42□□□□□ -0.26
USP42-207ENST00000521713 SLC25A2Q9BXI2 301 aa13.42□□□□□ -0.26
USP42-207ENST00000521713 OOSP1A8MZH6 123 aa13.41□□□□□ -0.26
USP42-207ENST00000521713 VDAC2P45880 294 aaPredicted RBP13.41□□□□□ -0.26
USP42-207ENST00000521713 PEMTQ9UBM1 199 aa13.41□□□□□ -0.26
USP42-207ENST00000521713 SRSF7Q16629 238 aaKnown RBP eCLIP13.41□□□□□ -0.26
USP42-207ENST00000521713 MYOD1P15172 320 aa13.41□□□□□ -0.26
USP42-207ENST00000521713 RASL11AQ6T310 242 aa13.41□□□□□ -0.26
USP42-207ENST00000521713 TRAV40A0A0B4J280 105 aa13.41□□□□□ -0.26
USP42-207ENST00000521713 SSBP4Q9BWG4 385 aaPredicted RBP13.41□□□□□ -0.26
USP42-207ENST00000521713 A0A1W2PRE2 83 aa13.4□□□□□ -0.26
USP42-207ENST00000521713 TEX38Q6PEX7 206 aa13.4□□□□□ -0.26
USP42-207ENST00000521713 IGKV1-12A0A0C4DH73 117 aa13.4□□□□□ -0.26
USP42-207ENST00000521713 HIGD1CA8MV81 97 aa13.4□□□□□ -0.26
USP42-207ENST00000521713 IGKV1D-12P01611 117 aa13.4□□□□□ -0.26
USP42-207ENST00000521713 SLC25A16P16260 332 aa13.4□□□□□ -0.26
USP42-207ENST00000521713 UBE2V1Q13404 147 aa13.4□□□□□ -0.26
USP42-207ENST00000521713 FOXL2NBQ6ZUU3 175 aa13.4□□□□□ -0.26
USP42-207ENST00000521713 TICRRQ7Z2Z1 1910 aa13.4□□□□□ -0.26
USP42-207ENST00000521713 FREM3P0C091 2139 aa13.4□□□□□ -0.26
USP42-207ENST00000521713 ETV2O00321 342 aaPredicted RBP13.4□□□□□ -0.26
USP42-207ENST00000521713 WNT2P09544 360 aa13.4□□□□□ -0.26
USP42-207ENST00000521713 C1QTNF9P0C862 333 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 AGMATQ9BSE5 352 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 MINOS1Q5TGZ0 78 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 FNDC4Q9H6D8 234 aaPredicted RBP13.39□□□□□ -0.27
USP42-207ENST00000521713 MINOS1-NBL1R4GNA1 71 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 IGHV3OR16-13A0A075B7E8 117 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 IGHV3-74A0A0B4J1X5 117 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 TIMM23O14925 209 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 TMEM144Q7Z5S9 345 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 FOXC2Q99958 501 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 SPANXA1Q9NS26 97 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 IGKV1D-13A0A0B4J2D9 117 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 IGKV1-13P0DP09 117 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 CLEC19AQ6UXS0 136 aa13.39□□□□□ -0.27
USP42-207ENST00000521713 PNRC2Q9NPJ4 139 aaKnown RBP13.39□□□□□ -0.27
USP42-207ENST00000521713 ZFHX2Q9C0A1 2572 aaPredicted RBP13.39□□□□□ -0.27
USP42-207ENST00000521713 IGKV3-15P01624 115 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 FAM159AQ6UWV7 190 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 CYSLTR1Q9Y271 337 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 C15orf61A6NNL5 157 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 NDUFS6O75380 124 aaKnown RBP13.38□□□□□ -0.27
USP42-207ENST00000521713 HBDP02042 147 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 GFI1BQ5VTD9 330 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 FAM166AQ6J272 317 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 BDP1A6H8Y1 2624 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 IGFBP2P18065 325 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 DUTP33316 252 aaKnown RBP13.38□□□□□ -0.27
USP42-207ENST00000521713 ACTL10Q5JWF8 245 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 A0A087WV48 116 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 IGHV3-23P01764 117 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 LHFPL1Q86WI0 220 aa13.38□□□□□ -0.27
USP42-207ENST00000521713 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.37□□□□□ -0.27
USP42-207ENST00000521713 SNAI2O43623 268 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 PPBPP02775 128 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 GEMIN7Q9H840 131 aaKnown RBP13.37□□□□□ -0.27
USP42-207ENST00000521713 A6NNC1 897 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 H3BTX0 84 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 TMEM42Q69YG0 159 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 SCGB3A1Q96QR1 104 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 WFDC1Q9HC57 220 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 CRIM1Q9NZV1 1036 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 PKDREJQ9NTG1 2253 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 FAM90A9PA6NNJ1 464 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 OR52E5Q8NH55 327 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 C18orf15Q96N68 181 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms